Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02386 ATGCCTCCTTGCTCAAGTTTTATTATATTCTTCCTTCTCTCATTGATCCAAGAAAGCTATGATTCTCAGGTGCTTCTCTCTCTTCCAACTGAAGCATTTCTCATAGCTAAGAAGGAAAAGTCAGAAGACAAGCTTAGAAAAAAACCTGCAGATATGGGGGCTCTAATTTGGCGCCTTGGGCTATTTTCCTTGTCTCTTCTCTTCACCTCAGATCTAACTACGGCAACAATATTAAGAGATGAAGGACACCAAGAAATCTCATACCAATTTAATACTCAATTGGATTCAGTTCCCATAGTTAACCCTACAACACCAAGCACAGCAAGCCCATACCCAACATTAAACCCAACAACTCCTCAATCACCGTACACAACAAGACAAAGCCCACCAACACCAACAACTACAACCCCACCCACTTACATGACTCCTACAAACCCCACCACATCCCCAAACACAAACCCAAACAATAGCCCATCAATAACACCAACTACAATGCCAACAAGCCCAAATACAAATACAAATCCTACAACCCCAACGTCTCCTGCTATATCAGGAGTTCAATGGTGCATTGCAAGTGCGTCAGCACAGGACAAGGCTCTGAAAGTGGCTCTTGACTATGCTTGTGGGTATGGGGCTGATTGTTCAGCAATTCAACCTGGAGCAAGTTGTTATAACCCAAACACACTGAAAGATCATGCTTCTTATGCTTTCAACGACTACTACCAGAAGAATCCAGCACCTACTAGTTGTTCATTTGGAGGAACAGCAACACTTACAAACAAGGATCCAAGTAATGGGAACTGCCACTATTCGTCGTCCAAATCATCAAGCATGAGTCCACCAACATCATATGGAAGCCCACCAAATGGAATGATGAGTCCAACAACAGCAGGAGGAAGCACCATGACCCCAACTGCACCAGGAGGCACCACAATGACCCCATCAACACCAAGCATGACAATTCCTGATGGAGCATCTGTTTATGGCCCAACTGGAAGCCCAAGCAAAGCCACACCTCTTTCTCAATCCTTCATGCTTCTCTTTGTTTCCGTGTTTGGCTACCAATGGGCTATTCACCTCATGTAG 1086 0.4438 MPPCSSFIIFFLLSLIQESYDSQVLLSLPTEAFLIAKKEKSEDKLRKKPADMGALIWRLGLFSLSLLFTSDLTTATILRDEGHQEISYQFNTQLDSVPIVNPTTPSTASPYPTLNPTTPQSPYTTRQSPPTPTTTTPPTYMTPTNPTTSPNTNPNNSPSITPTTMPTSPNTNTNPTTPTSPAISGVQWCIASASAQDKALKVALDYACGYGADCSAIQPGASCYNPNTLKDHASYAFNDYYQKNPAPTSCSFGGTATLTNKDPSNGNCHYSSSKSSSMSPPTSYGSPPNGMMSPTTAGGSTMTPTAPGGTTMTPSTPSMTIPDGASVYGPTGSPSKATPLSQSFMLLFVSVFGYQWAIHLM 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02386 361 MobiDBLite consensus disorder prediction 97 122 - -
Adu03g02386 361 MobiDBLite consensus disorder prediction 97 179 - -
Adu03g02386 361 MobiDBLite consensus disorder prediction 263 322 - -
Adu03g02386 361 Pfam X8 domain 187 257 IPR012946 -
Adu03g02386 361 PANTHER BETA-1,3 GLUCANASE 180 351 IPR044788 -
Adu03g02386 361 Gene3D - 183 282 - -
Adu03g02386 361 MobiDBLite consensus disorder prediction 263 334 - -
Adu03g02386 361 PRINTS Proline rich extensin signature 122 138 - -
Adu03g02386 361 PRINTS Proline rich extensin signature 157 178 - -
Adu03g02386 361 PRINTS Proline rich extensin signature 104 116 - -
Adu03g02386 361 PRINTS Proline rich extensin signature 276 301 - -
Adu03g02386 361 PRINTS Proline rich extensin signature 143 155 - -
Adu03g02386 361 MobiDBLite consensus disorder prediction 123 139 - -
Adu03g02386 361 MobiDBLite consensus disorder prediction 140 179 - -
Adu03g02386 361 SMART X8_cls 187 270 IPR012946 -
Adu03g02386 361 PANTHER BETA-1,3 GLUCANASE 180 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02386 Adu-Chr3 59492308 59499515 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02386 150 264 Glycoside Hydrolase AT5G55180 45.299 6.58e-26 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02386 - - gmx:102659696 268.085