Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02188 ATGAAAGGAACACTAAGATACTTAGCTGGAATTGCAGGGCCAAGTGGTTTTGGTTCAAATTCAACTGCTGAACAAGTCACTCATCAACACCATTCTTCTTCTTCTTCTTCTTCCAATCTAACCGCTATTATAACTGGGGCAAGTTCTGGAATTGGAGCTGAAACAGCAAGAGTGTTAGCAAAAAGAGGAGTGAAAGTTGTGATTGCGGCAAGGGATATAAAGAAGGCTAAACAAGTCAAAGAGAAGATACAAAAAGAGATTCCAAATGCTAAGGTGGTTATTTTGGAAATTAATCTTAGCTCCTTTGCTTCTATACACTCATTTTGCTCCCACTTTATAGCTTTGGACCTTCCTCTTAATATTCTCATCAGAAATAATGCTGGAGTATTCTCTCAAAATCTTGAATTCTCTCAAGAGAAGATTGAAATGACATTTGCCACAAATTACATAGGACATTTTTTGTTGACCGAAATTCTATTAGAGAAAATGATAGAAACAGCAGAGATGAGTGGCATTGAAGGAAGAATCATAAACGTTTCTTCTGTGATTCATAGCTGGGTGAAGAATAGAGATGCCTTTCATTTCAATGACATAATCAAAGGAACAAACTATAATGGCACAAGGGCATATGCTCGGTCAAAATTGGCCAATATTCTACATGCAAAGGAAATAGCTAGGCAGCTCAAGGCAAGGAATGCAAGAGTAACTATTAATGCAGTGCATCCAGGTATAGTTAAGACAGGAATTATTAGAGGTCATCAAGGCTTATTAATGGATTCAATATTTTTCATTGCATCAAAGTTACTTAAATCGACATCACAGGGTGCATCAACTACTTGTTATGTTGCTCTGAGCCAAAAAACAGAAGGTGGAAGTGGAAAATACTTTGCAGATTGCAATGAGAGCAAGTGCTCAAGACTTGCAAATGATGAATTAGAAGCTCAAAAACTATGGAACCAAACCCAAGCCTTGTTACATAATTATTTTTGA 990 0.3687 MKGTLRYLAGIAGPSGFGSNSTAEQVTHQHHSSSSSSSNLTAIITGASSGIGAETARVLAKRGVKVVIAARDIKKAKQVKEKIQKEIPNAKVVILEINLSSFASIHSFCSHFIALDLPLNILIRNNAGVFSQNLEFSQEKIEMTFATNYIGHFLLTEILLEKMIETAEMSGIEGRIINVSSVIHSWVKNRDAFHFNDIIKGTNYNGTRAYARSKLANILHAKEIARQLKARNARVTINAVHPGIVKTGIIRGHQGLLMDSIFFIASKLLKSTSQGASTTCYVALSQKTEGGSGKYFADCNESKCSRLANDELEAQKLWNQTQALLHNYF 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02188 329 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 4 327 - -
Adu03g02188 329 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 38 303 IPR036291 -
Adu03g02188 329 Gene3D - 26 329 - -
Adu03g02188 329 Coils Coil 66 86 - -
Adu03g02188 329 PANTHER RETINOL DEHYDROGENASE 4 327 - -
Adu03g02188 329 CDD retinol-DH_like_SDR_c_like 41 318 - -
Adu03g02188 329 Pfam short chain dehydrogenase 41 183 IPR002347 -
Adu03g02188 329 PRINTS Glucose/ribitol dehydrogenase family signature 41 58 IPR002347 -
Adu03g02188 329 PRINTS Glucose/ribitol dehydrogenase family signature 168 184 IPR002347 -
Adu03g02188 329 PRINTS Glucose/ribitol dehydrogenase family signature 210 229 IPR002347 -
Adu03g02188 329 PRINTS Glucose/ribitol dehydrogenase family signature 233 250 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02188 Adu-Chr3 42510838 42517483 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02188 19 252 Acyl Lipid Metabolism Gene Families AT1G63380 29.289 1.20e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02188 - - gmx:100799729 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02188 03 42510838 42517483 Adu03g02188 03 42510838 42517483 ECH