Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02180 ATGGCTCCACCATACTTAACCAAAAATAATGGTGCATTAGAAGAAATAGGAGAGGTTGTGGATGGTGGTGGAAGTGATAGTAGTAAGAATGAAAAAGAAGCTTTGTGTATAAAGTTAGAAGGATCAAACTTTGTTGCAAATGGAGAACCTTTTCTGCGGGAGGTTCCATCCAACATAGTAGCAACACGGTCGCCATATTCATCGGATGCAAACAACAACAACATCGTTGGTTGCTTCGTGGGCTTTGATGCCACCGAATCTAGGTGCCGCCACGTGGCTCCACTTGGCAAGCTCAAAGACATTAGGTTCATGAGCATATTCAGGTTTAAGGTATGGTGGACAACACATTGGGTTGGAAGCAATGGACACGAAGTGGAGCATGAAACTCAGTTGTTAATGTTGGACAAGAATGACCACTATGGTAGACCCTATGTTCTCCTGCTTCCCATTCTAGAAGGTTCCTTCCGAGCCTCACTTCAACCGGGTTTGGATGATTACGTGGACATGTGCGTTGAGAGTGGATCGACACGTGTCAGTGAATCCACCTTCAGAAGGTGTTTGTATATTCATGCTTCTCATGACCCTTTCCGTTTGGTCAAAGAAGCCATCAAGATCATACGCCTTCACTTGGGAACTTTCAAGCTCCTTGAAGAAAAAACTCCACCAGGTATTGTGGACAAGTTTGGTTGGTGTACATGGGATGCCTTCTACTTGAAGGTACACCCTAAAGGGGTATGGGAAGGTGTGAAAGGCCTTGTAGAGGGAGGGTGCCCTCCGGGTATGGTCTTAATCGACGACGGATGGCAATCAATTTGTCACGACGACGATCCAATCACAGATGAACAAGAAGGCATGAACCGAACATCGGCCGGCGAACAAATGCCATGTAGGCTGATTAAATTCGTAGAGAATTCTAAATTCAGGGACTACAAAGGAATTGTAGACCCTGACCAGAAAGGGATGGGTGCGTTTGTTAGGGACCTAAAGGAAGAATTCAAGAGTGTGGAACATGTTTACGTGTGGCATGCGCTTTGTGGGTATTGGGGTGGGATAAGGCCCAATGTGAAGGGAATGCCTATGTCTAAGGTTGTTGGTCCTAAGATGTCACAAAGTTTGCAAATGACAATGGAGGATCTTGCTGTGGATAAAATTGTGAATAATGGTGTTGGGTTGGTACCACCTCATTTGGTGCATCAATTGTATGAGGGACTTCACTCTCATTTGGAATCTGTGGGGATTGATGGGGTTAAGGTTGATGTTATACATTTGCTTGAGATGCTATGCGAGGAATACGGTGGTCGTGTGGATCTTGCAAAAGCTTATTACAAAGCACTTACAGATTCTGTGAAGAAGCATTTCAAAGGCAATGGAGTCATTGCTAGCATGGAGCATTGCAATGACTTCTTCCTTTTGGGCACCCAAGCCATTTCGCTAGGCCGAGTCGGAGATGATTTTTGGTGTACGGATCCGACGGGCGACCCGAACGGCACATACTGGCTACAAGGTTGTCACATGGTACACTGTGCCTACAACAGCTTATGGATGGGGAATTTCATTCAGCCAGATTGGGACATGTTCCAATCCACTCACCCCTGTGCTGAGTTCCATGCTGCCTCAAGAGCCATCTCTGGTGGACCAATTTATGTTAGTGATTGTGTTTCCAACCATAACTTCAAGTTGCTTAAGACTCTTGTTTTGCCTAACGGCTCTATCTTGAGGTGCCAACATTATGCACTTCCTACTAGAGATTGCTTGTTTATGGATCCATTGCATGATGGCAAAACAATGCTCAAGATTTGGAACCTCAACAAGTACACTGGAGTGTTGGGACTATTCAATTGCCAAGGAGGAGGTTGGTGCCCTGTGACAAGAAGAAACAAGAGTGCCTGTGAATTCTCAAACACAGTGACATGCTTTGCAAGCCCCAAAGACATTGAATGGAACAATGGTAATAATAATTCTAATGCTAATAATAAAAAACCAATTTCCATCAACGGTGTGGAAATTTTTGCAGTTTATCTCTTCAAGGAAAACAAATTGAAGCTAATGAAGAATTCAGACAAATTACAAGTTTCACTTGAACCATTCAGCTTTGAACTAATGACAGTTTCACCAGTTAGGGTGTTATCATCTTATAATTATAATGATAATAATGAGAGGCTAATTCAATTTGCACCAATTGGGTTAGTGAACATGCTTAACTCCGGTGGTGCAATTGAGTCACTTGTGTTTGATGATAAACAAAGCAGGGTCAAAATTGGAATAAAGGGTTGTGGGGAAATGAGAGTGTTTGCATCAAAGAAACCTATTGTTTGTAAGATTAATGGGGTGGATGTGGAATTTGATTATGAGGATAACATGGTTAGGGTTCATGTTCCATGGCCTATTCATGAACCAAAATTGTCAATGCTTGAGTATTTGTTTTGA 2427 0.4306 MAPPYLTKNNGALEEIGEVVDGGGSDSSKNEKEALCIKLEGSNFVANGEPFLREVPSNIVATRSPYSSDANNNNIVGCFVGFDATESRCRHVAPLGKLKDIRFMSIFRFKVWWTTHWVGSNGHEVEHETQLLMLDKNDHYGRPYVLLLPILEGSFRASLQPGLDDYVDMCVESGSTRVSESTFRRCLYIHASHDPFRLVKEAIKIIRLHLGTFKLLEEKTPPGIVDKFGWCTWDAFYLKVHPKGVWEGVKGLVEGGCPPGMVLIDDGWQSICHDDDPITDEQEGMNRTSAGEQMPCRLIKFVENSKFRDYKGIVDPDQKGMGAFVRDLKEEFKSVEHVYVWHALCGYWGGIRPNVKGMPMSKVVGPKMSQSLQMTMEDLAVDKIVNNGVGLVPPHLVHQLYEGLHSHLESVGIDGVKVDVIHLLEMLCEEYGGRVDLAKAYYKALTDSVKKHFKGNGVIASMEHCNDFFLLGTQAISLGRVGDDFWCTDPTGDPNGTYWLQGCHMVHCAYNSLWMGNFIQPDWDMFQSTHPCAEFHAASRAISGGPIYVSDCVSNHNFKLLKTLVLPNGSILRCQHYALPTRDCLFMDPLHDGKTMLKIWNLNKYTGVLGLFNCQGGGWCPVTRRNKSACEFSNTVTCFASPKDIEWNNGNNNSNANNKKPISINGVEIFAVYLFKENKLKLMKNSDKLQVSLEPFSFELMTVSPVRVLSSYNYNDNNERLIQFAPIGLVNMLNSGGAIESLVFDDKQSRVKIGIKGCGEMRVFASKKPIVCKINGVDVEFDYEDNMVRVHVPWPIHEPKLSMLEYLF 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02180 808 Pfam Raffinose synthase or seed imbibition protein Sip1 40 790 IPR008811 -
Adu03g02180 808 Gene3D Aldolase class I 223 566 IPR013785 -
Adu03g02180 808 PANTHER - 29 808 IPR008811 -
Adu03g02180 808 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 5-RELATED 29 808 - -
Adu03g02180 808 SUPERFAMILY (Trans)glycosidases 222 575 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02180 Adu-Chr3 42429529 42435812 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02180 1 808 Glycoside Hydrolase AT5G40390 63.004 0.0 1048
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02180 K06617 - gmx:100800308 1271.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02180 03 42429529 42435812 Adu03g02180 03 42429529 42435812 ECH