Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02179 ATGGCGAAGCTTCAAAGCTTGTTCTCCATGAGGCACTTGTTGGTGCTCTCTCTGGCTCTCAATGTAAGCCTCATACTCAGAATGATGTATGATTCCCAACTTGATCTCTTCTTCTACAAATATCCTCGTCAGGGGCAAATTAGTAATCTCCACCCTCAAAATAAACCTCGCTTGCTTATATCTTCTTCTTTCTCCAACTCTTCTTCTTCTACTTGTGAGGATCATCATCAACCACCACCCAAAAACAACAACAGAGTCATCAATCTCGACCATGGAGACCCGAGAGTGTACGAAGCATTTTGGAGAGAAACGGGAGAGAAAACAACGATCAAAATTGCAGGGTGGCAATCGATGAGTTACTTCTCAGATGTGAGCAATGTTTGTTGGTTTCTAGAACCTGAGTTTGCAGAGGAGGTTGTGAGGCTCCACCGTGTGGTGGGAAATGCTGTGACAGAGGATCGTCACCTTGTTGTTGGAACGGGTTCCTCTCAGCTCTTTCTTGCTGCTCTCTATGCTCTCTCTCCAACTAATTCTCCTCAACCCATCAGTGTTGTCTCTGCTTCCCCCTACTACTCTTCATACCCATCAATGACGGATTACCAGAAATCAGGGCTATACAAATGGGGTGGTGATGCTGACAAGTTTGACATAAGTGGGCCCTACATTGAGTTGGTTACTTCTCCCAACAACCCTGATGGCTTCGTCAGGCGTTCAGTGCTCAACCGCTCTGAGGGTCTACTGGTCCACGACCTTGCTTATTACTGGCCTCAGTACACTCCTATTTCTTCCCCTTCCAACCATGATCTTACCCTTTTCACTCTTTCTAAGACTACTGGTCATGCTGGAATGCGCATTGGGTGGGCTCTTGTGAAAGACAAAGAAGTAGCAAAGAAAATGACCAAATTCATAGAGCTCAATACCATAGGAGTCTCTAAGGACTCACAGCTTAGGGCCGCCAAGGTTCTGAGGGCAGTTTCCGACAGCTGCAAACTACAAGGCGGTGGCGAGTCCTTTTTCCAGTTCAGCCACAAAATCATGACAGACAGATGGAAACAACTCAGAGAAGCAGTTCAGCGTAGTAATGGATTCTTCAGTGTCCCTACATTCTCTCCTTCTTTTTGCACCTTCTTTAATCAAAACTTGGTGCCTCATCCAG 1156 0.4611 MAKLQSLFSMRHLLVLSLALNVSLILRMMYDSQLDLFFYKYPRQGQISNLHPQNKPRLLISSSFSNSSSSTCEDHHQPPPKNNNRVINLDHGDPRVYEAFWRETGEKTTIKIAGWQSMSYFSDVSNVCWFLEPEFAEEVVRLHRVVGNAVTEDRHLVVGTGSSQLFLAALYALSPTNSPQPISVVSASPYYSSYPSMTDYQKSGLYKWGGDADKFDISGPYIELVTSPNNPDGFVRRSVLNRSEGLLVHDLAYYWPQYTPISSPSNHDLTLFTLSKTTGHAGMRIGWALVKDKEVAKKMTKFIELNTIGVSKDSQLRAAKVLRAVSDSCKLQGGGESFFQFSHKIMTDRWKQLREAVQRSNGFFSVPTFSPSFCTFFNQNLVPHP 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02179 385 Gene3D - 59 127 IPR037029 GO:0016846
Adu03g02179 385 SUPERFAMILY PLP-dependent transferases 70 376 IPR015424 -
Adu03g02179 385 Pfam Allinase 87 385 IPR006948 GO:0016846
Adu03g02179 385 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 4 380 - -
Adu03g02179 385 MobiDBLite consensus disorder prediction 64 88 - -
Adu03g02179 385 PANTHER TRYPTOPHAN AMINOTRANSFERASE-LIKE PROTEIN 4 380 - -
Adu03g02179 385 MobiDBLite consensus disorder prediction 64 84 - -
Adu03g02179 385 CDD AAT_like 133 377 - -
Adu03g02179 385 Gene3D - 132 335 IPR015421 GO:0003824
Adu03g02179 385 Gene3D Aspartate Aminotransferase, domain 1 336 385 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02179 Adu-Chr3 42413548 42423072 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02179 K16903 - gmx:100807013 520.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02179 03 42413548 42423072 Adu03g02179 03 42413548 42423072 ECH