Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02173 ATGTCACTGGAACACTACTCCGCTGGAATCGTCGGACAGCTCGCCAACCCTCTTCAATGGCCCCAGCTTCGCAAAAGGCGACGCCACTATCACTCTCACTCTCACCACCGCCATGCTGTCCTCCCTCCGCCGCCGCCTCCTCCGCCGCCGCGCCGGAATGGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAACAGTAACAACACCACCACCACTAACAAGGTCTCCTTGATTCGCTCAGTGGATTCTCTCCCTGAATCAACTTCCACCAATGCCCCTACTGCCAAAGGAATCACGGCAATGCCAAGGGCACAGTCAAGCCACCCTTTGGACCCTTTATCTGCTGCCGAAATCTCTGTGGCTGTGGCAACTGTGAGGGCTGCTGGAGCCACTCCCGAGGTTAGGGACAGTATGCGCTTCATTGAAGCAGTTTTGAGGGAACCGGATAAACACATTGTTGCACTGGCAGATGCTTATTTCTTTCCACCTTTCCAGCCATCATTACTTCCTAGAACCAAAGGAGGCCCTGTGATTCCTACCAAACTCCCTCCAAGATGTGCTAGACTTGTTGTTTACAATAGGAAATCAAATGAAACGAGTATATGGATCGTTGAATTATCACAAGTACATGCTGTAACTCGAGGTGGTCATCATCGAGGAAAAGTCATTTCTTCACATGTTATTCCTGATGTTCAGCCTCCAATGGATGCTGTGGAATATGCAGAATGTGAGGCTGTTGTTAAAGATTATCCTCCATTTATAGAAGCTATGAAGAAAAGGGGTATTGAAGACATGGAGCTTGTAATGGTTGATCCCTGGTGCACTGGTTATCACAGTGAAGTTGATGCTCCCAGCAGAAGACTTGCCAAACCACTTATATTTTGTCGATCCGAGAGTGACTGCCCTATGGAAAATGGCTATGCTCGCCCAGTTGAGGGAATTCATGTTCTAGTTGATCTGCGAAATATGGTGGTGATAGAGTTTGAAGACCGCAAACTTGTTCCTCTGCCACCTGTTGATCCCTTGAGGAACTATACTCCTGGTGAAACACGAGGTGGCTCTGATAGAAGTGATGTCAAGCCCTTGCAAATTAGTCAACCTGAAGGTCCAAGCTTTCGTGTCAATGGACAATATGTAGAGTGGCAGAAGTGGAATTTCCGTGTTGGATTCACACCCAAAGAGGGTTTGGTTATATATTCTGTTGCTTATGTTGATGGTAGTCGAGGGCGAAGGCCTGTAGCACATAGGCTGAGCTTTGTAGAGATGGTTGTACCCTATGGAGATCCGAACGATCCACACTACAGAAAAAATGCTTTTGATGCTGGGGAAGATGGCTTGGGGAAAAATGCACATTCTCTCAAGAAGGGTTGTGATTGTTTGGGCTACATCAAATACTTTGATGCTCACTTCACAAATTTCACTGGTGGAGTGGAGACAATTGAAAACTGTATATGTTTGCATGAAGAGGATCATGGAATTCTTTGGAAGCATCAAGACTGGAGAACTGGCTTAGCAGAAGTTCGAAGGTCTAGAAGGCTTTCAGTATCGTTTATATGCACAGTGGCCAACTATGAGTATGCATTTTTTTGGCATTTTTATCAGGATGGAAAGATTGAAGCCGAAGTTAAGCTTACTGGAATTCTCAGCTTAGGAGCACTGATGCCTGGAGAGCTTCGAAAATATGGAACCATGATTGCTCCAGGTCTATATGCTCCGGTCCATCAACACTTCTTTGTTGCTCGCATGGACATGGCTGTTGATTCTAAACCTGGTGAAGCTTTGAATCAGGTAGTGGAGGTCAACATGAAAGTTGAGGAAGTTGGTGACCATAATGTTCATAATAATGCATTTTTTGCTGAAGAAACGTTGCTCAAATCTGAGCTGGAAGCAATGCGTGATTGTGAGCCTTTGACTGCTCGACATTGGATTGTAAGGAACACAAGAACAGGCAATAGAACTGGACAGTTGACAGGATTCAAGCTGGTACCCGGCACAAACTGCTTACCATTAGGAGGTCCTGAGGCCATGTTTTTAAGAAGAGCTGCCTTCTTGAAGCATAATCTTTGGGTAACAACATACTCACGCGACGAAATGTTTCCTGGAGGAGAATTTCCGAACCAAAATCCGCGCATCGGCGAAGGGCTTGGTTAA 2187 0.4481 MSLEHYSAGIVGQLANPLQWPQLRKRRRHYHSHSHHRHAVLPPPPPPPPPRRNGXXXXXXXXXXXXXXXXXXXXXXNSNNTTTTNKVSLIRSVDSLPESTSTNAPTAKGITAMPRAQSSHPLDPLSAAEISVAVATVRAAGATPEVRDSMRFIEAVLREPDKHIVALADAYFFPPFQPSLLPRTKGGPVIPTKLPPRCARLVVYNRKSNETSIWIVELSQVHAVTRGGHHRGKVISSHVIPDVQPPMDAVEYAECEAVVKDYPPFIEAMKKRGIEDMELVMVDPWCTGYHSEVDAPSRRLAKPLIFCRSESDCPMENGYARPVEGIHVLVDLRNMVVIEFEDRKLVPLPPVDPLRNYTPGETRGGSDRSDVKPLQISQPEGPSFRVNGQYVEWQKWNFRVGFTPKEGLVIYSVAYVDGSRGRRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIENCICLHEEDHGILWKHQDWRTGLAEVRRSRRLSVSFICTVANYEYAFFWHFYQDGKIEAEVKLTGILSLGALMPGELRKYGTMIAPGLYAPVHQHFFVARMDMAVDSKPGEALNQVVEVNMKVEEVGDHNVHNNAFFAEETLLKSELEAMRDCEPLTARHWIVRNTRTGNRTGQLTGFKLVPGTNCLPLGGPEAMFLRRAAFLKHNLWVTTYSRDEMFPGGEFPNQNPRIGEGLG 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02173 728 SUPERFAMILY Amine oxidase N-terminal region 244 362 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Adu03g02173 728 Pfam Copper amine oxidase, enzyme domain 374 722 IPR015798 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Adu03g02173 728 MobiDBLite consensus disorder prediction 22 108 - -
Adu03g02173 728 Pfam Copper amine oxidase, N3 domain 245 348 IPR015802 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Adu03g02173 728 SUPERFAMILY Amine oxidase N-terminal region 118 246 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Adu03g02173 728 Gene3D Copper amine oxidase, catalytic domain 361 728 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Adu03g02173 728 Gene3D - 250 352 - -
Adu03g02173 728 Gene3D - 104 247 - -
Adu03g02173 728 MobiDBLite consensus disorder prediction 22 38 - -
Adu03g02173 728 SUPERFAMILY Amine oxidase catalytic domain 368 722 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Adu03g02173 728 MobiDBLite consensus disorder prediction 39 53 - -
Adu03g02173 728 PANTHER AMINE OXIDASE 85 727 - -
Adu03g02173 728 MobiDBLite consensus disorder prediction 74 108 - -
Adu03g02173 728 Coils Coil 77 77 - -
Adu03g02173 728 MobiDBLite consensus disorder prediction 355 378 - -
Adu03g02173 728 PANTHER COPPER AMINE OXIDASE 85 727 IPR000269 GO:0005507|GO:0008131|GO:0009308|GO:0048038
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02173 Adu-Chr3 42287134 42292731 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02173 K00276 - gmx:100798722 1199.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02173 03 42287134 42292731 Adu03g02173 03 42287134 42292731 ECH
Adu01g01761 01 64567465 64569267 Adu03g02173 03 42287134 42292731 PCT