Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02132 ATGGGTGGATCAAGTTCTAAAAGAAGTAGTTCTAGGCGTTCAACCACGAGGTCGAATTCAAATTCATGGTACCCTCAATATCAAACACCTTCTTATGCACAAAACCCTCAGTATCATGAGCCTCAGGGTTATCAATATCATGGCAATACATCTCAAAGCTATGGTGGCAGCGGGAGTGGCCGTCCCGCGGAGCAGAAGAAGAGGTTGGATAGGAAGTATTCGAGGATAGATGACAATTATCATAGCTTGGAGCAGGTAACCGATGCTCTGGCAGGTGCTGGCCTAGAATCTTCCAACCTCATTGTTGGTATTGATTTTACAAAGAGCAACGAGTGGACAGGTGGAAGATCATTTCAAAGGAGATGCTTGCATCACATTGGTCACGAGCAAAATCCATACGAACAAGCTATATCTATCATTGGGAAAACATTGTCTTCCTTCGATGAGGATAACCTGATTCCTTGTTTTGGGTTCGGTGATGCATCGACACATGACCAAGAAGTTTTTAGTTTCTACCCGGATGATAGATTTTGTCACGGATTTGAAGAAGTGTTGTCACGATATCGGGAATTAGTCCCTCAATTAAGGCTTGCAGGACCGACATCATTTGCCCCAATTATTGAGATGGCAATCTCCATTGTTGAGCAAAGTGGAGGCCAGTACCATGTCTTATTGATCATAGCTGATGGACAGGTAACAAGAAGTGTTGATACCGAGCGTGGTCAATTGAGTGCACAAGAAAAGAAAACGGTAGAAGCTATCGTGAAAGCAAGCGAATATCCCTTATCGATCATTCTGGTTGGAGTTGGCGACGGGCCGTGGGACATGATGAGAGAATTTGATGATAACATCCCTGCCCGAGCATTTGATAATTTCCAGTTTGTGAATTTTACGGAAATAATGTCAAAGAACATGGATCGATCACGCAAGGAAGCAGAGTTTGCACTTGCTGCTTTGATGGAAATACCCTCTCAGTACAAGGCAACACTAGAACTTAACATATTGGGTGCTCGCAGAGGGAAAGATATAGACAGGATTGCTCTCCCACCACCACTATATGGTTCCAATACGCCATCTTATAACTCTCCGAAAGCTTCGCGACAAAACAGTTTCCGCCCCACTGCGCCATCTCACAGTCAAAGACACGATGTTTTTCCCGCACATTCTCCTGCCACGTCTGCATCTGATAATCAGCTTTGTCCCATTTGTCTTACTGATCCCAAGAACATGGCATTTGGTTGTGGGCATCAGACATGCTGTGAATGTGGACAAGAGCTTGAATTATGCCCCATATGCAGGAGTACTATTGACACAAGAATTAAACTTTATTAA 1332 0.4399 MGGSSSKRSSSRRSTTRSNSNSWYPQYQTPSYAQNPQYHEPQGYQYHGNTSQSYGGSGSGRPAEQKKRLDRKYSRIDDNYHSLEQVTDALAGAGLESSNLIVGIDFTKSNEWTGGRSFQRRCLHHIGHEQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSFYPDDRFCHGFEEVLSRYRELVPQLRLAGPTSFAPIIEMAISIVEQSGGQYHVLLIIADGQVTRSVDTERGQLSAQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFDDNIPARAFDNFQFVNFTEIMSKNMDRSRKEAEFALAALMEIPSQYKATLELNILGARRGKDIDRIALPPPLYGSNTPSYNSPKASRQNSFRPTAPSHSQRHDVFPAHSPATSASDNQLCPICLTDPKNMAFGCGHQTCCECGQELELCPICRSTIDTRIKLY 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02132 443 Pfam Zinc finger, C3HC4 type (RING finger) 397 438 - -
Adu03g02132 443 MobiDBLite consensus disorder prediction 1 69 - -
Adu03g02132 443 PANTHER RING-FINGER PROTEIN 1 443 - -
Adu03g02132 443 SMART VWA_4 97 300 IPR002035 -
Adu03g02132 443 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 378 443 IPR013083 -
Adu03g02132 443 ProSiteProfiles Zinc finger RING-type profile. 400 433 IPR001841 -
Adu03g02132 443 SUPERFAMILY RING/U-box 391 439 - -
Adu03g02132 443 MobiDBLite consensus disorder prediction 348 394 - -
Adu03g02132 443 PANTHER COPINE FAMILY PROTEIN 1 1 443 - -
Adu03g02132 443 MobiDBLite consensus disorder prediction 354 377 - -
Adu03g02132 443 SUPERFAMILY vWA-like 98 281 IPR036465 -
Adu03g02132 443 CDD RING-HC_RGLG_plant 399 443 IPR045317 GO:0061630|GO:0070534
Adu03g02132 443 MobiDBLite consensus disorder prediction 1 59 - -
Adu03g02132 443 Pfam Copine 122 335 IPR010734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02132 Adu-Chr3 41892569 41897593 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02132 K16280 - gmx:100809850 706.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02132 03 41892569 41897593 Adu03g02132 03 41892569 41897593 ECH