Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02115 ATGAAAATGGCGGAACAAATCGAAGCAAAGGTCGCAGCAGCACCACCACCACCAACAACAACAACGGAAGCTGCAGAGATTCCTTCTAGCTCCAATTCCAAGGGTCTTAACCCTACCAAGCTCGTTGTTCTCGCTGACCTCAACGATCCTCCTGAAGCCGCCGACGACGACGACCCCCTCCCTCTCCCCCTCCACCATAATCTCCCTCCTCCTCCACCGCCACCACCGCTTCCGCCGCCTCCAATCACCAGGTTGGCAAATGATGAAAACAGCCAAGACAAGAGTTTGTTGTCCAAAGAAAATGATACAGTTGAAGGTGAAGGTAAAAAGTTGAACAAATTGGGGAAATCTCGCTCCAGACTTAGCAAGACAGATTCTTCTCTTGACTGTGGAGCTGATGCAGATGGTGATCAACATGTTCAGGGGGCTACTTCCTCTCGGGAGGAAAAAGTTAGCAGCATGAAAACTGGCTTGGTTCATGTTGCAAGAAAGATGCCCAAGAATGCTCATGCTCATTTTATTCTTGGCTTGATGTACCAAAGATTAAGCCAACCTCAAAAGGCTATATTAGCTTATGAGAAGGCTGCCGAGATCTTACTCAAGCCTGAGGCTGAGATTGACAGGCCAGAGTTGCTTTCGTTAGTTCAGATTCATCACGCACAGTGCCTGATACTAGAAAGTTCATCAGAAAATAGTTCAGATAAAGAACTTGAACCTCATGAACTTGAAGAAGTTCTCTCTAAACTCAAAGAGTCAATGCAGTCAGATATCAGACAGGCAGCTTTATGGAATACACTAGGTTTTATTCTTCTTAAGAGTGGCCGTGTGCAGAGTGCTATCACAGTTTTGTCATCATTGTTGGCCATTGCACCGGAGAACTATGATTGCTTGGGGAACCTTGGGATAGCTTATCTTCAAAGTGGGAATTTGGAATTATCTGCAAAATGTTTCCAGGAGCTCATCCTGAAGGATCAAAACCACCCTGCAGCTTTAGTAAATTATTCTTCCCTACTTTTGTGTAAACATGCTTCAGTCGTAGCAGGTGCTGGTGCCAGTGCTGCTGAAGATGCTTTGGCAGATCGTGCTATGGCTATTCATGTTGCTAAGGAATGTTTGTTATCTGCAATTAAAGCGGATGGCAAATCAGCCCATATATGGGCAAATCTTGCAACTGCATTTTCTCTTAGTGGTGATCATCGAACATCCAGCAAGTGCTTGGAGAAGGCAGCAAAACTGGAACCCAATTGCATGTCTACTCGATATGCTGTTGCTATCCATCGAATAAAGGAGGCAGAAAGATCTCAAGATCCTAGTGAACTGCTTTCATGCGCTGGAAACGAGATGGCTTCTATAATAAGGGATGGTGATTCATCACTGGTTGAGCTTCCAATAGCATGGGCTGGGCTTGCCTTGGTTCACAAATCTCAGCATGAGATAGCAGCCTCATATGATAGTGAACATCATGAGTTGATGGAAGTTGAAGAGCGCACTGTTAGCAGTTTAAAGCAGGCTATAGCAGAAGATCCAGATGACCCTGTGCAGTGGATTCAACTTGGCCTCCATAGTCTTTGCGCTCGGCAATTCAAAACATCACAGAAGTACCTCAAAGCTGCTGTTGCCTGTGACAAGGACTGCAGCTATGCTTGGTCTAACCTAGGTGTTTCCCTTCAACTATCAGAGGAACGGTTACATGCTGAAGAAGTATATAAGAAAGCTTTGTCTTTAGCAACTACCGAACAAGCACATGCGATATTATCCAACTTGGGGATTCTCTACCGCTATCAAAGACAATATCAACGAGCTAAGGCTATGTTTTCAAAGTCACTTGAACTTCAACCTGGATATGCCCCTGCATTCAACAACCTGGGTCTTGTGTTTGTAGCTGAGAGTCTTTTGGAAGAAGCCAAGTATTGTTTTGAAAAAGCCCTTCAATCAGACCCTTTGCTTGATGCAGCCAAGTCCAACTTGGTTAAGGTGATTTCCATGTCAAACTTGTGTAGAGACCTCTCTTCATGCCACGTTAAAGAATGA 2031 0.4481 MKMAEQIEAKVAAAPPPPTTTTEAAEIPSSSNSKGLNPTKLVVLADLNDPPEAADDDDPLPLPLHHNLPPPPPPPPLPPPPITRLANDENSQDKSLLSKENDTVEGEGKKLNKLGKSRSRLSKTDSSLDCGADADGDQHVQGATSSREEKVSSMKTGLVHVARKMPKNAHAHFILGLMYQRLSQPQKAILAYEKAAEILLKPEAEIDRPELLSLVQIHHAQCLILESSSENSSDKELEPHELEEVLSKLKESMQSDIRQAALWNTLGFILLKSGRVQSAITVLSSLLAIAPENYDCLGNLGIAYLQSGNLELSAKCFQELILKDQNHPAALVNYSSLLLCKHASVVAGAGASAAEDALADRAMAIHVAKECLLSAIKADGKSAHIWANLATAFSLSGDHRTSSKCLEKAAKLEPNCMSTRYAVAIHRIKEAERSQDPSELLSCAGNEMASIIRDGDSSLVELPIAWAGLALVHKSQHEIAASYDSEHHELMEVEERTVSSLKQAIAEDPDDPVQWIQLGLHSLCARQFKTSQKYLKAAVACDKDCSYAWSNLGVSLQLSEERLHAEEVYKKALSLATTEQAHAILSNLGILYRYQRQYQRAKAMFSKSLELQPGYAPAFNNLGLVFVAESLLEEAKYCFEKALQSDPLLDAAKSNLVKVISMSNLCRDLSSCHVKE 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02115 676 SUPERFAMILY TPR-like 166 419 IPR011990 GO:0005515
Adu03g02115 676 MobiDBLite consensus disorder prediction 63 83 - -
Adu03g02115 676 Pfam Tetratricopeptide repeat 270 329 - -
Adu03g02115 676 Pfam Tetratricopeptide repeat 584 614 IPR013105 -
Adu03g02115 676 Gene3D Tetratricopeptide repeat domain 155 219 IPR011990 GO:0005515
Adu03g02115 676 Gene3D Tetratricopeptide repeat domain 231 418 IPR011990 GO:0005515
Adu03g02115 676 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN 26 674 - -
Adu03g02115 676 Gene3D Tetratricopeptide repeat domain 570 659 IPR011990 GO:0005515
Adu03g02115 676 SUPERFAMILY TPR-like 500 647 IPR011990 GO:0005515
Adu03g02115 676 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN-RELATED 26 674 - -
Adu03g02115 676 MobiDBLite consensus disorder prediction 1 152 - -
Adu03g02115 676 Gene3D Tetratricopeptide repeat domain 460 569 IPR011990 GO:0005515
Adu03g02115 676 MobiDBLite consensus disorder prediction 93 123 - -
Adu03g02115 676 ProSiteProfiles TPR repeat profile. 383 416 IPR019734 GO:0005515
Adu03g02115 676 SMART tpr_5 169 202 IPR019734 GO:0005515
Adu03g02115 676 SMART tpr_5 616 649 IPR019734 GO:0005515
Adu03g02115 676 SMART tpr_5 383 416 IPR019734 GO:0005515
Adu03g02115 676 SMART tpr_5 546 579 IPR019734 GO:0005515
Adu03g02115 676 SMART tpr_5 582 615 IPR019734 GO:0005515
Adu03g02115 676 SMART tpr_5 512 545 IPR019734 GO:0005515
Adu03g02115 676 SMART tpr_5 294 327 IPR019734 GO:0005515
Adu03g02115 676 SMART tpr_5 260 293 IPR019734 GO:0005515
Adu03g02115 676 ProSiteProfiles TPR repeat profile. 616 649 IPR019734 GO:0005515
Adu03g02115 676 ProSiteProfiles TPR repeat profile. 260 293 IPR019734 GO:0005515
Adu03g02115 676 MobiDBLite consensus disorder prediction 23 38 - -
Adu03g02115 676 ProSiteProfiles TPR repeat profile. 582 615 IPR019734 GO:0005515
Adu03g02115 676 Pfam Tetratricopeptide repeat 169 198 IPR019734 GO:0005515
Adu03g02115 676 Pfam Tetratricopeptide repeat 383 416 IPR019734 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02115 538 656 Glycosyltransferase AT3G11540 29.600 8.20e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02115 - - adu:107478871 1182.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02115 03 41747178 41752555 Adu03g02115 03 41747178 41752555 ECH