Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02076 ATGGCAAGGCTGCTCCGTAACACTTCACTTATCAGACGCTCTTTCTTACAACCCGATACAGTGAATGCATTTCTTGTTTCTGAAGAAGCTCTTGGTTATAGACTTAAACGAGGAATTTTCGGCATGTCTCAATCTTTGAGCTTTTCAAGTAAAGGTAGAAGGCGCTCTAAGTCAGATGGAAGTGACTCTTGTGAAGAGAACATGTCTAAGAAAGATTTGGCCTTACAACATGCCATGGATCAGATCACTTCTGCTTTTGGAAAGGGATCTATCATGTGGCTTGGTCGTACTATCTCACCAAAAGATGTACCTGTGGTCTCAACTGGTTCATTTGCTCTAGATATAGCGCTCGGTGTTGGTGGTCTTCCAAAGGGACGTGTTGTGGAAATATTTGGACCTGAGGCTTCTGGGAAAACAACTCTTGCTTTACATGTGATTGCTGAGGCACAGAAGCTAGGAGGGTATTGTGCCTTTGTTGATGCTGAGCATGCACTTGATAAGTCACTTGCAGAGTCTATTGGTGTTAATACCGAGAACTTGCTTTTATCACAACCAGATTGTGGTGAACAGGCACTTAGTCTTGTAGATACCCTAATTCGGAGTGGTTCACTTGATGTAATTGTTGTCGATAGTGTGGCTGCCCTTGTTCCTAAAGGTGAACTTGATGGTGAGATGGGTGATGCTCACATGGCCATGCAAGCTAGGTTGATGAGCCAGGCGCTTCGGAAGTTGTGCCACTCCTTATCACTCTCGCAGTGTATATTGATTTTTATAAACCAGGTGAGGTCAAAGCTTTCAACTTTTGGGGGTTTTGGTGGGCCGACTGAAGTTACTTGTGGCGGTAATGCACTGAAATTCTATGCTTCTGTTCGGCTAAATATCAAAAGAGTAGGGCTTGTGAAGAAAGGTGAAGAGACTTTAGGGAGCCAGGTTCAAGTTAAAATTGTTAAGAACAAGCTTGCGCCTCCATTTAAAACGGCGCAGTTCGAACTCGAGTTTGGGAAGGGTATTTGTAAAGAATCCGAGATTATAGAACTTAGCCTAAAACACAAGCTAATCTCAAAGAATGGTGCATATTTCGGGTATAATGGCCAGAATTTCCATGGCAAGGATGCCTTGAAGAGGTTCCTGGCTGAAAGTGATAACACACAAGAATTAACAGCGAAGCTTCGCGAGAAGCTACTTAACACTGAGAAAGAATCAGTCACGGAGTCACAGGATTCTAGTGACAATGAAACTGCTGTTGCTTTAGAAGCATGA 1260 0.4333 MARLLRNTSLIRRSFLQPDTVNAFLVSEEALGYRLKRGIFGMSQSLSFSSKGRRRSKSDGSDSCEENMSKKDLALQHAMDQITSAFGKGSIMWLGRTISPKDVPVVSTGSFALDIALGVGGLPKGRVVEIFGPEASGKTTLALHVIAEAQKLGGYCAFVDAEHALDKSLAESIGVNTENLLLSQPDCGEQALSLVDTLIRSGSLDVIVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLCHSLSLSQCILIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASVRLNIKRVGLVKKGEETLGSQVQVKIVKNKLAPPFKTAQFELEFGKGICKESEIIELSLKHKLISKNGAYFGYNGQNFHGKDALKRFLAESDNTQELTAKLREKLLNTEKESVTESQDSSDNETAVALEA 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02076 419 Gene3D - 101 404 IPR027417 -
Adu03g02076 419 TIGRFAM tigrfam_recA: protein RecA 71 391 IPR013765 GO:0003697|GO:0005524|GO:0006281
Adu03g02076 419 PANTHER RECA 1 406 IPR013765 GO:0003697|GO:0005524|GO:0006281
Adu03g02076 419 Pfam recA bacterial DNA recombination protein 74 337 IPR013765 GO:0003697|GO:0005524|GO:0006281
Adu03g02076 419 ProSitePatterns recA signature. 283 291 IPR020584 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Adu03g02076 419 CDD recA 70 396 IPR013765 GO:0003697|GO:0005524|GO:0006281
Adu03g02076 419 SMART AAA_5 124 298 IPR003593 -
Adu03g02076 419 PRINTS RecA protein signature 160 189 IPR013765 GO:0003697|GO:0005524|GO:0006281
Adu03g02076 419 PRINTS RecA protein signature 194 223 IPR013765 GO:0003697|GO:0005524|GO:0006281
Adu03g02076 419 PRINTS RecA protein signature 232 261 IPR013765 GO:0003697|GO:0005524|GO:0006281
Adu03g02076 419 PRINTS RecA protein signature 280 308 IPR013765 GO:0003697|GO:0005524|GO:0006281
Adu03g02076 419 PRINTS RecA protein signature 313 342 IPR013765 GO:0003697|GO:0005524|GO:0006281
Adu03g02076 419 PRINTS RecA protein signature 366 383 IPR013765 GO:0003697|GO:0005524|GO:0006281
Adu03g02076 419 SUPERFAMILY RecA protein, C-terminal domain 339 392 IPR023400 -
Adu03g02076 419 Hamap Protein RecA [recA]. 71 398 IPR013765 GO:0003697|GO:0005524|GO:0006281
Adu03g02076 419 ProSiteProfiles RecA family profile 1. 102 261 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Adu03g02076 419 ProSiteProfiles RecA family profile 2. 271 342 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Adu03g02076 419 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 75 337 IPR027417 -
Adu03g02076 419 MobiDBLite consensus disorder prediction 397 419 - -
Adu03g02076 419 PANTHER REPAIR PROTEIN RECA, PUTATIVE-RELATED 1 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02076 Adu-Chr3 41120563 41125374 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02076 K03553 - gmx:100807627 624.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02076 03 41120563 41125374 Adu03g02076 03 41120563 41125374 ECH
Adu01g02058 01 87728200 87732609 Adu03g02076 03 41120563 41125374 PCT