Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02023 ATGATCAAGGGGAAGGACATATACAATGTTATTGCAGGCATTGTGCCCTTGTACGTGGCCATGTTCTTAGGTTATGGCTCAGTTCGGTGGTGGAAGATCTTAACGCCGGAGCAATGCTCCGGCGTCAACCGTTTCGTGTCGATGTTCGCGGCCCCTTTCCTGGCATTTAAGTTCATATCGGCCAACAACCCTTACAAGATGAACTTCAAGTTCTTGGCGGGAGACTCGTTACAAAAGGTTTTCGTTATGGTTGTGCTTTATATATGGAATCTAACGAGATTCGGGAATATGGACACAGGCATAATTATCTATGCCCTTTTTGCTTTGCCTAATACCCTAGTCATGGGTATTCCCTTAATGGAAGCAATGTACGGAAAATTCTCTACACCTCTCATTACTCAAATTGTTGTCTTGCAAAGCGTCATATGGAACACCGTCTTGTTGATTCTGTTCGAGTATAGGGCGGCTAAAATCCTCATCCAAGAGCAATTCCCCGACAACACGGCCGCTATTGCCACAGTGACAATAGATCCGGACGTGGAGTCCCTAGGCGGGGAGCCCCTGCAAGCTGACACGGACGTGGGACATGACGGGAAGCTTCATGTGGTGGTGAGAAGATCAGCATCCGTATCATCTAATAATACATCTTACAAGTCTTTTGAATTGCCTTCCTCAGGCTTATCTAGGGCTTCTTCAAGTGTTAGTGAAATCCATTCTATTTACTCCGCTAGAGAAACCCCGTTAAGATATCCAAGCTTTGAGAGTCCTCATATTATTAATTTGCCAAAAAGCATGTCCGTTGGTACTATTTTGGAAGAGGATTTGAAGAGGCCAAAGAAATTCTGGGGTGGAAGTCGCAAAAATAATAGTAGAGTTTCCTCTATTTGTACCAATGACGACAGTATTGGATCTTCTAACGGTGTTCATGATGAATTGACTGAAACTAAAGAAAATTCGAGAAGTTCTTTAAGTGGGAGCTGGAAGAAGATGGAGAATATTGAAGAAAATGTTGAAAACAAGAAGAAACAAATGCCATCTGCGAGGGTCATGACGAAGCTCATTACAGTAATGGCTTATAGGAAGCTCTCATGGAACCCTAATACATGGGCAAGTGTTGTTGGCATCACGTGGTCCCTCATAGCATACAGGTGTCACATCAAAATGCCGTCCATAATTGAAGGTTCCATTACAATAGTGTCAAATACCGGTTTGGGTATGGCTATGTTTAGTCTAGGTCTATTCATGGCATTACAACCAAAGATCATTGCTTGTGGAAAAAAGTGGGCAGCAATTTCTATGGGTGTTAGGTTCTTGGCTGGTCCGGCACTGATTGCTGCAACCTCAGCACCAATTGGTATCCGTGGAGATCTTTTACGAGTTGAAATTATTCAGGCTGCTCTACCCCAAGGTATCATTCCCTTTATATTTGCTAAAGAATACAATCTTTATCCAGATATCTTCAGTACTGCGGTTATCTTCGGAATGGTGGTTGCATTGCCCGTAACAATAATATACTACGTGCTTCTTGGGCTTTAA 1536 0.431 MIKGKDIYNVIAGIVPLYVAMFLGYGSVRWWKILTPEQCSGVNRFVSMFAAPFLAFKFISANNPYKMNFKFLAGDSLQKVFVMVVLYIWNLTRFGNMDTGIIIYALFALPNTLVMGIPLMEAMYGKFSTPLITQIVVLQSVIWNTVLLILFEYRAAKILIQEQFPDNTAAIATVTIDPDVESLGGEPLQADTDVGHDGKLHVVVRRSASVSSNNTSYKSFELPSSGLSRASSSVSEIHSIYSARETPLRYPSFESPHIINLPKSMSVGTILEEDLKRPKKFWGGSRKNNSRVSSICTNDDSIGSSNGVHDELTETKENSRSSLSGSWKKMENIEENVENKKKQMPSARVMTKLITVMAYRKLSWNPNTWASVVGITWSLIAYRCHIKMPSIIEGSITIVSNTGLGMAMFSLGLFMALQPKIIACGKKWAAISMGVRFLAGPALIAATSAPIGIRGDLLRVEIIQAALPQGIIPFIFAKEYNLYPDIFSTAVIFGMVVALPVTIIYYVLLGL 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02023 511 MobiDBLite consensus disorder prediction 303 325 - -
Adu03g02023 511 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 313 511 - -
Adu03g02023 511 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 268 - -
Adu03g02023 511 PANTHER AUXIN EFFLUX CARRIER COMPONENT 2 1 268 IPR033526 GO:0010315|GO:0010329
Adu03g02023 511 TIGRFAM 2a69: auxin efflux carrier 1 511 IPR014024 -
Adu03g02023 511 Coils Coil 330 350 - -
Adu03g02023 511 Pfam Membrane transport protein 10 506 IPR004776 GO:0016021|GO:0055085
Adu03g02023 511 PANTHER AUXIN EFFLUX CARRIER COMPONENT 2 313 511 IPR033526 GO:0010315|GO:0010329
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02023 Adu-Chr3 38045510 38049461 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02023 282 502 Organic Solute Cotransporters AT1G73590 49.784 2.10e-60 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02023 K13947 - gmx:100788935 484.567