Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02013 ATGCGCTCAGGAGGTTGTACATTGCAACAGACGCTCACAGCGGAGGCGGCTTCAGTGGTGAAGCACGCGCTGGTGTTGGCGCGTAGGAGAGGCCATGCACAGGTGACCCCTCTCCACGTGGCCGCCACTTTGCTGTCTCTGAGAGCCAGCTCTCTCCGCCGAGCATGCCTCAGATCTCAATTTCCCAACCACCAGCAACACCCTCTTCAGTGCAGGGCGCTTGAGCTTTGCTTCAATGTCGCTCTCAATAGACTCCCTACCACAACGCCAACGCCGCCTAACTTTCTCACCGCTAATCCCTCTCTTTCCAATGCTCTCATTGCTGCTCTTAAACGAGCCCAGGCTCACCAGCGTCGCGGCTGCATTGAGCAGCACCAACAGCAGCCTCTTCTTGCTATCAAAGTTGAGCTTGAACACCTTATTATTTCCATTCTTGATGATCCTTCTGTTAGTCGGGTCATGAGAGAAGCTGGATTTTCCAGCACCGCTGTTAAGACTAATATTGAAGATTCTTCTTCTTCTTCTTCTCCAACTTCTCATTCCTCTTCTGCTGCTGGACCTTGTTCTGTTTTCTACGCCAACAACACCAACACTTTCACCACTCTCAGGCACCATCATTTCTTGGGTGGTAATTCTTCTGAGTACCTTCCATCTTCAGCAATGCTGTTTTCCCCTCAGCACAAGTCTTGCAACAAGGAAGACATGATGGCGGTTCTTAATGCGCTGTTAAGCAAGAAGAGGAACACTGTGATAGTTGGCGACTCTTTGTCGATAAGCGAGGCAGTGATGGCGGAACTGATGGTGAAGCTTGAAAGAGGCCATGTACCTGATGAGCTGAAGAACACACAGTTGATCAAGTTCCAATTCTCAGGGCAGATGAAAAGGGAGGAAGTGGAAATGAAGCTCGCAGCACTGAAGAGAAAAGTAGAAGTAGGAGGTGCCATTTTCTATGTTGGGGACTTGAAGTGGACGGTGGAAGGTGAAGGAGGAGGAGAAGTTGAACATGTAGTACAAGAGATTGGGAAGTTGTTTAATGAAAAGAATAGTAATAATAAGAAGGTGTGGCTAATGGGAACAGCGAGTTACCAAACATATATAAAGTGTCAAAGAAGGGAGCCACCTCTTGAGAACCACTGGGCTCTTCAGCCTGTTCCTGTTCCATCATCAGCTCGACTTGCCTTGACTCTCCATGCTACTTCCAGTGTGTATGATTCGAAGATGAGCATGCCCCACAACTCTTCTCACATGTTTGACATAATGCACTTGATGAGTAACAAGAAGGAGGACGAGGAGGAAGAAAAACTGAATTGTTGTGAAGAATGTGCGTCCAATTATGAAAAAGAACTTGGGTTGTTCAAGCCAGGACACAAGAAACTCTTACCTTCTTGGCTTCAGACACATACCACCGAGGCCCATCCAAAGGATGAATTGGGAGAGCTGAAGAGAAAATGGAACAGACTTTGTAACTGTCTCCACCATAGCAAACAACTTGGGCAATATGGTAACAATAACAATGCAAAGATCTATCCTTACAATTCGTCATACCCATGGTGGCCAAATCAAAACACTCTCTTCCCAGATTCAAATTCAACTTCCATATCTTTTGCTGATCCTGTTCTGCCTCATCATCATCATCATAACTCCAACAACAACCACCACCACCACCTGGTGCCGCGGTTCCGGCGCCAACAATCATGCTCTACCATTGAGTTCAATTTCACCGAGGTCACTCAGAAAAAACAAGAATCAATAACAAGATCAGCCACCTTGGACAATCAAGAAGTAAATATTTCTCTGGCTCTTGGAAATTCAACTTTCAGAGATGATGATGGTTCGGGCCAAACACTGGTACTTCAAAGTAGAGCTCATATTTGTAAAGTGTTGCAGGAAAATGTTCCATGGCAATCTGAAACACTTCCTTCAATAGCAGAGGCCTTAGTTGAACTTGATTCAGGAATAACAACAAAGAAACAATGGTTTCTTTTGCAGGGGAATGACTTTGTTGGCAAAACAAGGTTAGCGCGTGCCATCGCTGAATCCGTGTTTGGATTCGGCCTTGTGGATAATCATGATGATGTTTTCCTTCACTTGGATATGAAGAAAGTCGGGCATTCTTCTGTTACCATATTTCCTGAAGTTCTTGCTACATCACTGAGAACCAAAGAGAAGCTTGTTGTTTTAATTGAAGATTTCGATTTGGCCGATTCCCGGTTCAAGAAGTTTGTTGTTGATGAGTTTGAGGCATCAAAGTTTGGGAATTTAAGCAAAAAAGACGAGAATCTAAAGCAAGCTATATTCATTTTGACTTCGGGTGGGGTCGACGGCGATGAGGTGATCAAGAACAAGGACAAGGACTCATCGGTCATGAATTTGGTGTTCAAGATTGAAACCAAGGCTAGCACCATGGATTTTTCATCTTCATCGTTGGCAGCTGATTGTTACTTGGGCCACAAGAAAAGAAGGGCTCATGAACTAGACTTGTTTGGAAAGATTAACAAGAGTCCAAGAATTGAAGAGAATGAAGAGAACTTGTTGCTTCAGGGACAAGTAAACAAGAAGAAAGACTTTTCAAGACAATCGAGTTCCAATACCCTTGATCTTAACATGAAAGCAGATGAAGAAGACTACGATGATGGAGAAGAAGATGAGAGTAGCCCAATTTCAAGTGATTTAACCAGAGATACAATGGCTGAACACATGAACTCAAATGGGTTCCTTGAATCAATTGAGAACAGGTTTGAGTTCAACCAAAGTCCAGCTAGATTGAAAGAAAAAGAGGAACTTTTTTTGAACAAGATCAAAGAGTCTTTTGATGAGGTTTTTGAGAAGAAGAAGATGGTGAAGTTCAATGTAGATGAAAAGGTGATAGAGGAAATTGGTGTTGGGTGTGGTAATTTTACTAACAGCGTGTTTGAGAAATGGCTGAAAGACATTTTTCAAAACAAGTTATTAGAGACAGTTATTAACTGTGATCATGGGAAGGAGGGTATAGTTTTTAATATTACACTTTGTTTGGGGGGTGGTAATGGTAAAGGATATAATAGTAAATTTGATAATAGTAGTGGGGGTGGTGGCGGGTTCATGAATTCATGTTTGCCCAAGAATATCCAAATTAACTACTTCATGGATTGA 3132 0.4333 MRSGGCTLQQTLTAEAASVVKHALVLARRRGHAQVTPLHVAATLLSLRASSLRRACLRSQFPNHQQHPLQCRALELCFNVALNRLPTTTPTPPNFLTANPSLSNALIAALKRAQAHQRRGCIEQHQQQPLLAIKVELEHLIISILDDPSVSRVMREAGFSSTAVKTNIEDSSSSSSPTSHSSSAAGPCSVFYANNTNTFTTLRHHHFLGGNSSEYLPSSAMLFSPQHKSCNKEDMMAVLNALLSKKRNTVIVGDSLSISEAVMAELMVKLERGHVPDELKNTQLIKFQFSGQMKREEVEMKLAALKRKVEVGGAIFYVGDLKWTVEGEGGGEVEHVVQEIGKLFNEKNSNNKKVWLMGTASYQTYIKCQRREPPLENHWALQPVPVPSSARLALTLHATSSVYDSKMSMPHNSSHMFDIMHLMSNKKEDEEEEKLNCCEECASNYEKELGLFKPGHKKLLPSWLQTHTTEAHPKDELGELKRKWNRLCNCLHHSKQLGQYGNNNNAKIYPYNSSYPWWPNQNTLFPDSNSTSISFADPVLPHHHHHNSNNNHHHHLVPRFRRQQSCSTIEFNFTEVTQKKQESITRSATLDNQEVNISLALGNSTFRDDDGSGQTLVLQSRAHICKVLQENVPWQSETLPSIAEALVELDSGITTKKQWFLLQGNDFVGKTRLARAIAESVFGFGLVDNHDDVFLHLDMKKVGHSSVTIFPEVLATSLRTKEKLVVLIEDFDLADSRFKKFVVDEFEASKFGNLSKKDENLKQAIFILTSGGVDGDEVIKNKDKDSSVMNLVFKIETKASTMDFSSSSLAADCYLGHKKRRAHELDLFGKINKSPRIEENEENLLLQGQVNKKKDFSRQSSSNTLDLNMKADEEDYDDGEEDESSPISSDLTRDTMAEHMNSNGFLESIENRFEFNQSPARLKEKEELFLNKIKESFDEVFEKKKMVKFNVDEKVIEEIGVGCGNFTNSVFEKWLKDIFQNKLLETVINCDHGKEGIVFNITLCLGGGNGKGYNSKFDNSSGGGGGFMNSCLPKNIQINYFMD 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02013 1043 MobiDBLite consensus disorder prediction 853 867 - -
Adu03g02013 1043 MobiDBLite consensus disorder prediction 871 885 - -
Adu03g02013 1043 Gene3D - 614 815 IPR027417 -
Adu03g02013 1043 Pfam Clp amino terminal domain, pathogenicity island component 24 46 IPR004176 -
Adu03g02013 1043 Pfam Clp amino terminal domain, pathogenicity island component 135 171 IPR004176 -
Adu03g02013 1043 Gene3D - 9 174 IPR036628 -
Adu03g02013 1043 Coils Coil 428 448 - -
Adu03g02013 1043 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 623 772 IPR027417 -
Adu03g02013 1043 SUPERFAMILY Double Clp-N motif 12 169 IPR036628 -
Adu03g02013 1043 ProSiteProfiles Clp repeat (R) domain profile. 8 174 IPR004176 -
Adu03g02013 1043 PANTHER PROTEIN SMAX1-LIKE 5 1 1006 - -
Adu03g02013 1043 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 1006 - -
Adu03g02013 1043 MobiDBLite consensus disorder prediction 853 890 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02013 Adu-Chr3 37339027 37343129 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02013 - - aip:107630350 1945.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02013 03 37339027 37343129 Adu03g02013 03 37339027 37343129 ECH
Adu01g02108 01 88311513 88315384 Adu03g02013 03 37339027 37343129 PCT