Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02003 ATGAAGAATGATAATAAGCAGCATGATCAACACGAGCAAGAACGTCGTTCCCCTGCAGCAGCAGTAGCAGCATATGTGAGGTTGTTTTTGAGTGCACAACAACTCCATCTATTCAACTTGTTTTCCCATCTTCTTCTCTTGGCCTTTGGATTCATCATAGGGATCACACTCGCTTTCTCTCTCAACCGGCAGCACCTCCTTCTCCCTTCTAATAACAATAATCCTGTTTCTGTCAATAACAATAGTCAAAGCGGGATCAAGAGAGATGGGTTGGGGAGTTTCTTGATGGCAGGAAAGGAGGCAATAATGCATGACATGAGCGACGATGAGTTGTTGTGGAGAGCTTCCATGGTTCCCAAGATTCGGGAAGTGCCACTCAGAATCAAGCCAAAGGTAGCGTTCATGTTCTTGACGAGAGGACCTCTGTATTTGGGTCCACTGTGGGAGAGATTCTTCAAAGGAAACGAAGGCTTCTATTCAATCTACATCCACTCCCATCCTTCTTTCAATGCTTCTTCAGTCCCCAAAACCTCCGTTTTTTATGGCCGCAGAATTCCAAGCAAGGGGGTAAGGTGGGGTGACTTCAACATGGTAGATGCAGAGAGGCGTCTACTAGCAAATGCACTGCTGGACATGTCGAACCAACGCTTCGTTCTTGTATCGGAGTCGTGCATCCCTCTCTTCAACTTCTCCACCGTTTATGGGTATCTCATGAACTCATCCAAGACATTTGTGGAAGCCTACGATCTTGCGGGGCCCGTGGGGAGGGGCAGGTACTCCCAAAGGATGAGGCCACTGATCAAGCCGTCCCAGTGGAGAAAGGGGTCCCAGTGGTTCCAGATAGACCGTGCCCTGGCACTGGAAGTGGTCTCGGACCGCCAGTACTACCCGGTGTTCAAGAAGCACTGCAGGTACGGCGGCTGCATTGCCGACGAGCACTATTTGCCCACTCTTGTTAGCATCAAGTTCTGGAGGAGGAATGCCAACAGGACTTTGACTTGGGTTGATTGGTCAAAGGGCGGGTCCCATCCATCCAGGTACATGAGAAGCGATGTCACTGTTTCGTTCTTGAAGAGACTAAGGCATGGAACCAGATGCCGCTACAATGGCAAGACCACCAATGTTTGCCACTTGTTTGCAAGGAAGTTCATGCCTCACTCTCTCGATAGATTGCTAAGGTTTGCTCCCCGCTTAATGCACTTCCATTCTTCTTGA 1215 0.4922 MKNDNKQHDQHEQERRSPAAAVAAYVRLFLSAQQLHLFNLFSHLLLLAFGFIIGITLAFSLNRQHLLLPSNNNNPVSVNNNSQSGIKRDGLGSFLMAGKEAIMHDMSDDELLWRASMVPKIREVPLRIKPKVAFMFLTRGPLYLGPLWERFFKGNEGFYSIYIHSHPSFNASSVPKTSVFYGRRIPSKGVRWGDFNMVDAERRLLANALLDMSNQRFVLVSESCIPLFNFSTVYGYLMNSSKTFVEAYDLAGPVGRGRYSQRMRPLIKPSQWRKGSQWFQIDRALALEVVSDRQYYPVFKKHCRYGGCIADEHYLPTLVSIKFWRRNANRTLTWVDWSKGGSHPSRYMRSDVTVSFLKRLRHGTRCRYNGKTTNVCHLFARKFMPHSLDRLLRFAPRLMHFHSS 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02003 404 PANTHER CORE-2/I-BRANCHING ENZYME 24 401 - -
Adu03g02003 404 Pfam Core-2/I-Branching enzyme 132 360 IPR003406 GO:0016020|GO:0016757
Adu03g02003 404 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 24 401 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02003 Adu-Chr3 36978494 36980815 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02003 - - gmx:100815747 519.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02003 03 36978494 36980815 Adu03g02003 03 36978494 36980815 ECH
Adu03g02003 03 36978494 36980815 Adu05g02660 05 93450182 93455573 PCT
Adu01g02134 01 88602940 88608224 Adu03g02003 03 36978494 36980815 PCT