Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02000 ATGAGGTCTTCTTTGGAGACGATCAACATCGCTGCAAGTACTCAGAAGCTTGAAGTTGATAATCGAATTTCTCTTCGTTTCTACTATCGGATTGCAGATAATATCCTCAAACAGGCAGATATCTTTCGTGCTGAGAATAATATTGTTGATTTATATATCATGCTGCTAAGATTTTCTAGCCTGGTCTCTGAGACAATTCCATGTCACCGAGACTATAGAACATCTCCACAAAGCAAGAAAGTATCATTAAGAAAGAGATTGTTAAATTCTATGAATGAACTGGAGAAGTTGAAACCACTGGTACGACAGAAGATCATTGAGTTTAACAGCAGGCAAGCATATCAACACAATGGGTGGGAAAAAAATCATTCAAATAGTTTGATGCATTTCTCTCCAATGAAAAAGGAAACCTTGCCTAGTTACGGTCTAATAAAGGAAGTCAGACCAAGAGCTGGAGAGTTTGTCTCCGAGGGATCAAGGGGTCAGCCTTTTTCTTATGCAAAGCCTATTGACGAGAAAATGAGACGATTATCTCTAACTCTCCCACGTCCAACAGATGAAACTCTCTCTAGACATTCGATTCTTGGTCCCAGTGGGCTTAACGGGCAGTGGCTACCACCTATAAGTGATAAACGGGTCAGGTATCCATCCAACATTGATCTCTCACCAATTGAAATTCCAAGCCTACAACAAGATTTGGAAGATGGATCTCAGAAGAAAAAAGATAATAGCGCTGTAGAACACAATAATTTGGATATGAATTCCAGTCTTACTCAAACTGAGGACTGCCAGGCTCAGCATGCTGATGAACCTCCTTCTCTTATCTCTTTTGAAGAAGTAACAGAAATCACTCCTCAAATAGAAGTTATAAGACAGCCTTCTCCGCCGCCTGTACTTGCTGAAGTACAAGATTTGGTTCCTCCAGTTTCACATCAGGTGAATGATGTGGAATGTAAGATAGAGACCACATCATCAGATAATTTCCTTTGTGGCGAGTCTCCTCTGCAACTACACATTTCAACTGCTATGATGGAAACTTTTATGAAGTTTGCAAAATCAAATACTAAAAAGAATTTGGAGACTTGTGGAATTCTTGCAGGTTTGCTTAAAAATAGAAAATTTTATATTACGGCTCTAATAATCCCAAAGCAAGAGGCTACGTCAAGTTCTTGTCAAGCCACAAATGAAGAAGAAATATTTGAAGCACAGGATAAGAGATCACTTTTCCCACTTGGATGGATCCATACACATCCTACACAATCTTGTTTCATGTCATCCATTGATGTACACACCCATTATTCATATCAGATTATGCTGCCAGAAGCTGTTGCAATAGTCATGGCACCAACTGACAGTTCAAGAAAACATGGCATATTTAGGTTGACAAGCCCGGGTGGCATGTCGGTGATCAGACAGTGCCCGCAGCGTGGTTTTCATCCGCACAATCCGCCGCCGGATGGTGGTCCCATCTACGATACATGTACAGATGTTTACATGAATCCTGATTTGAATTTTGATGTCATTGATCTACGATGA 1536 0.403 MRSSLETINIAASTQKLEVDNRISLRFYYRIADNILKQADIFRAENNIVDLYIMLLRFSSLVSETIPCHRDYRTSPQSKKVSLRKRLLNSMNELEKLKPLVRQKIIEFNSRQAYQHNGWEKNHSNSLMHFSPMKKETLPSYGLIKEVRPRAGEFVSEGSRGQPFSYAKPIDEKMRRLSLTLPRPTDETLSRHSILGPSGLNGQWLPPISDKRVRYPSNIDLSPIEIPSLQQDLEDGSQKKKDNSAVEHNNLDMNSSLTQTEDCQAQHADEPPSLISFEEVTEITPQIEVIRQPSPPPVLAEVQDLVPPVSHQVNDVECKIETTSSDNFLCGESPLQLHISTAMMETFMKFAKSNTKKNLETCGILAGLLKNRKFYITALIIPKQEATSSSCQATNEEEIFEAQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPEAVAIVMAPTDSSRKHGIFRLTSPGGMSVIRQCPQRGFHPHNPPPDGGPIYDTCTDVYMNPDLNFDVIDLR 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02000 511 PANTHER AMSH-LIKE UBIQUITIN THIOESTERASE 3 511 - -
Adu03g02000 511 SUPERFAMILY JAB1/MPN domain 336 467 - -
Adu03g02000 511 Gene3D - 1 126 - -
Adu03g02000 511 PANTHER AMSH-LIKE PROTEASE 3 511 - -
Adu03g02000 511 CDD MPN_AMSH_like 336 511 IPR044098 GO:0016579|GO:0061578|GO:0070536|GO:0140492
Adu03g02000 511 Pfam USP8 dimerisation domain 10 99 IPR015063 -
Adu03g02000 511 Gene3D Cytidine Deaminase, domain 2 318 511 - -
Adu03g02000 511 SMART pad1_6 336 464 IPR000555 GO:0005515|GO:0008233|GO:0008237
Adu03g02000 511 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 334 440 IPR000555 GO:0005515|GO:0008233|GO:0008237
Adu03g02000 511 ProSiteProfiles MPN domain profile. 337 467 IPR037518 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02000 Adu-Chr3 36862174 36866617 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02000 K11866 - gmx:100800636 800.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02000 03 36862174 36866617 Adu03g02000 03 36862174 36866617 ECH