Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01986 ATGAGTAGTAGTGGCAAGAGAAAGCTGATTCCGATGAACATAGAAGAGGCTGCACTCTTGTTGAGCCATGTGACTCAGCCTCGGATCCCATTCTTGCTTGCTTTACTGTTCCTCATTGCTTACTGGGTTTCTTGTTTCTCCAATTTGCTTCTCCTTGCACTTGCTCTTTGGACAACTATCCAATATCAGAGTTATCAACGCAAACTGCTTGAGGAGGACTTGAACAAGAAATGGCGCCGCATCATGCTCAACTCCTCGCCCGTTACACCATTGGAACACTGTGAATGGTTGAATAAGTTCTTGACTCAAGTCTGGCCCAACTATTTTAATCCAAAGCTTTCAAGAAGGTTATCCGCTATAGTGGAGAAGCGGTTAAAGCTCCGGAAACCAAGCCTTATAGAGAAAGTTGACCTGCGGGAGTTCTCACTAGGATCATGCCCTCCAAGTTTGGGTCTTCAAGGGGTGCGGTGGTCAACTTCTGGTGATCAGCGGATCTTGAACATGGGTTTTGATTGGGACACTAGTGACATGAGTATTTTGATGCTTGCCAAACTTGCCAAGCCATTGATGGGAACTACCCGAATTATGATTAACAGTCTTCATATCAAGGGTGATCTCCTCATTACACCAATTCTAGATGGAAAAGCCCTTCTGTATTCATTTTCATCAAAACCTGAGGTGAGAATTGGAATTGCGTTTGGAAGTGGTGGAACAGAGGTGCCTGGTGTTTCTTCTTGGCTGGAGAAACTTTTTACTGACACTTTGCTTAAAACTATGGTGGAACCTCGGCGCCGATGCTTCTCTTTGCCGGCAGTGAATTTAAGGAAAAGAGTTGTTGGAGGCATTATATATGTTACAGTGATTTCAGCAAACAAACTTTCTAGGAGTTGCTTTAAGGGAAGCCCATCTTTGAGGCAGCAAAATGGCTGCTTGGAAGAAAAATTGGATGACAAGGACCTGCAGACATTTGTGGAAGTAGAAGCAGAGGAATTGACAAGGAGGACAGGTGTGAGCCGAGGTTCAACACCAACATGGGATGCAACGTTTAATATGGTATTACATGATAGTACAGGAATTGTTCGCTTTAATCTTTATGAGTGCCTTCCCAGCAGTGTGAAGTATGACTACCTAGCAAGTTGTGAAATCAAGATGAGGCATGTTGAAGATGATTCAACAATAATGTGGGCAACTGGGCCAAACTCTGGTGTCATAGCAACACATACAAAAGATTGTGGAGATGAAATTGAAATGACTGTTCCATTTGAGGGGGCCAGCTCTGGAGAGTTGAAGGTGAGAATTGTAGTAAAAGAATGGCAATTTGCTGATGGTTCACATAGCTTGAACAGCCTCAGTACTAGCTCTCAGCCACCACTAAGTGAATCATCAAATCTGCAGTCAAAAACTGGAAGGAAACTTAGGATAACCGTTGTTGAAGCAAAAGATCTAGCTACAAAAGACAAATTTGGAAAAGTTGATACATATGTCAAACTGCAGTATGAAAAGACTATCCAGAAAACCATGAATGCTCAAACTCCGAATCCCATTTGGAATCAATCATTTGAATTTGATGAGACGGGTGGTGATGAATACCTAAATGTAAAGTGCTTTACTAATGAAGTTTTTGGAGATGAAAATACTGGTAGTGCTCATGTAAATTTGGAGGGACTAGTAGACAGCTCAGTCAAGGATGTGTGGATCCCTCTCGAAGGAGTGAGTTCTGGCGAGTTAAGACTTAAGATAGAAGTAGTTAAGGTGAATGACCAAGAAGGATCAAGGGATACAGCTTCGAGCTCACAAAAAGGTTGGATAGAACTAGTTGTGATTGAAGCAAGGGATCTTATTGCTGCTGATCTTAGAGGGACAAGTGATCCTTATGTGAGGGTAGACTATGGAAACTTGAAGAAAAGGACAAAGGTTATTCCCAAGACTTTGAATCCTCAATGGAACCAGACCTTAGACTTCCTGGACGATGGCAGTCTCCTTGTACTGCGTGTTAAGGACCATAATGCATTACTGCCCACATCAAGCATCGGTGAATGTGTTGTGGAATATCAAAGGTTGCCTCCAAACCAGATGGTAGACAAGTGGATACCTCTCCAAGGGGTGAAAAGTGGCGAGATCCACATCCAAATTACAAGAAATGTCCCTGAGATGAAAATGAGACAAGTTGTGGATTCTGAACCTTCGTTAAGCACATTGCACCAAATTCCTACCCAGATGAAAGAGATGATGATGAAGTTTCGATCGTTAATAGACGACGGGAATGTTGAAGGACTGTCTAGGATTTTGAGTGAGCTAGAAACTCTGGAGGACACTCAGGAAGGATATATAGCGCAGCTGGAGACACAGCAAATGATGCTTCTCAGCAAAATAAAGGAATTAGGACAGCAGATCATCAATTCTTCTCCATCCCTTCAGAACTAA 2424 0.4266 MSSSGKRKLIPMNIEEAALLLSHVTQPRIPFLLALLFLIAYWVSCFSNLLLLALALWTTIQYQSYQRKLLEEDLNKKWRRIMLNSSPVTPLEHCEWLNKFLTQVWPNYFNPKLSRRLSAIVEKRLKLRKPSLIEKVDLREFSLGSCPPSLGLQGVRWSTSGDQRILNMGFDWDTSDMSILMLAKLAKPLMGTTRIMINSLHIKGDLLITPILDGKALLYSFSSKPEVRIGIAFGSGGTEVPGVSSWLEKLFTDTLLKTMVEPRRRCFSLPAVNLRKRVVGGIIYVTVISANKLSRSCFKGSPSLRQQNGCLEEKLDDKDLQTFVEVEAEELTRRTGVSRGSTPTWDATFNMVLHDSTGIVRFNLYECLPSSVKYDYLASCEIKMRHVEDDSTIMWATGPNSGVIATHTKDCGDEIEMTVPFEGASSGELKVRIVVKEWQFADGSHSLNSLSTSSQPPLSESSNLQSKTGRKLRITVVEAKDLATKDKFGKVDTYVKLQYEKTIQKTMNAQTPNPIWNQSFEFDETGGDEYLNVKCFTNEVFGDENTGSAHVNLEGLVDSSVKDVWIPLEGVSSGELRLKIEVVKVNDQEGSRDTASSSQKGWIELVVIEARDLIAADLRGTSDPYVRVDYGNLKKRTKVIPKTLNPQWNQTLDFLDDGSLLVLRVKDHNALLPTSSIGECVVEYQRLPPNQMVDKWIPLQGVKSGEIHIQITRNVPEMKMRQVVDSEPSLSTLHQIPTQMKEMMMKFRSLIDDGNVEGLSRILSELETLEDTQEGYIAQLETQQMMLLSKIKELGQQIINSSPSLQN 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01986 807 Coils Coil 777 797 - -
Adu03g01986 807 Gene3D C2 domain 280 423 IPR035892 -
Adu03g01986 807 CDD C2 283 391 - -
Adu03g01986 807 SMART C2_3c 471 565 IPR000008 -
Adu03g01986 807 SMART C2_3c 602 696 IPR000008 -
Adu03g01986 807 SMART C2_3c 282 396 IPR000008 -
Adu03g01986 807 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 90 270 IPR031468 GO:0008289
Adu03g01986 807 Gene3D C2 domain 585 714 IPR035892 -
Adu03g01986 807 Gene3D C2 domain 457 584 IPR035892 -
Adu03g01986 807 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 470 585 IPR035892 -
Adu03g01986 807 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 275 392 IPR035892 -
Adu03g01986 807 ProSiteProfiles C2 domain profile. 452 566 IPR000008 -
Adu03g01986 807 ProSiteProfiles C2 domain profile. 584 697 IPR000008 -
Adu03g01986 807 PANTHER PLANT SYNAPTOTAGMIN 1 806 - -
Adu03g01986 807 Pfam C2 domain 471 568 IPR000008 -
Adu03g01986 807 Pfam C2 domain 282 390 IPR000008 -
Adu03g01986 807 Pfam C2 domain 603 699 IPR000008 -
Adu03g01986 807 CDD C2 603 699 - -
Adu03g01986 807 MobiDBLite consensus disorder prediction 446 466 - -
Adu03g01986 807 PANTHER OS01G0128800 PROTEIN 1 806 - -
Adu03g01986 807 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 597 712 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01986 Adu-Chr3 36585906 36590803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01986 320 734 Lipid Metabolism Gene Families AT3G61300 22.407 5.10e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01986 - - ccaj:109803570 1195.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g02640 05 93173544 93183379 Adu03g01986 03 36585906 36590803 ECH
Adu03g01986 03 36585906 36590803 Adu03g01986 03 36585906 36590803 ECH
Adu03g01986 03 36585906 36590803 Adu05g02640 05 93173544 93183379 PCT