Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01980 ATGACATGTTCCAAAGAAGTTGTTCTTAGAGTCTTCAATTATGCCTCAGGCTATTTCCATCTTCTCCTCAATCATGTCTCAACCTCTTTTCAGCTTCTCTTCCTCTTCCTCTTCTCCCTCGCTATTTTTCTCCTCACCTTCTCAACCTTCACTGGCAGATTCCCCTTAATCCAAAGAGATCAGCAATATGAATATGTGTTTTCTGAAGACGACGAAGAAGAAGAAGAAGAAGCGCAACAAGGATATGGTCACCATACTGAGAAGGTGAGAGATCATGTAGCAGCATCATCTGCAGACTCAATCCATGGCAGGGAAACCCTTTTGTTTGAGGAGCCTCAGAAAAAGCAGCATTGTTCTTATTCTGAAGAGTTTGCAACCCCCCGAGAGAGCTTGAATGAGGAAGACTCAGAATTTATAGGAAGAAATGATGATTCTGTTTCAAACTCTGTCTCATTTGCAAGCAGACCAACCTCTACTATCACCATGAACACATATAAATGTAACAAAAACTCCCAAGCAGATGAACGTGTTTGTGTTGGAAGAACAACAAAGAATAAGAAGGTGCAGGAGGCAAAGCTCACCAGGGATGATAGGTTCTTTATTTTTGATCCAACCCATCAGTTCCAAAATAAGAAGCTGACTGTTGAAGATAAGCATCATGATGATGATGATGATGATGGTGATTCGTGCATTGATGGTTCTAGTTCTACACCTAGGGTCTCCTCTGAATGGAGGAGCTCCATTCATTTCAAGGATTCTGAGACAGAAGAAGCATTGTCTTCATCATCTAGAAGAAGTTGCCCCAAGTGGGAATCATATACTTTGTTCCAAAAATATGATGAAGAAATGTCCCTCTTAGACAGAATTAGTGCACAGAAACTTGAGGAAACAGAGTATTTAAGATCCATGGAAGCCTCTCCAAGATCAATTTCAGAGCGTATTGCATCAAGTGTGAAGAAGAAAGCAGGTGATATAGGTCACAATAACCCATATGGGGAAGGGGAACTAGAGGCCGCTTATGTTGCACAGATTTGCTTAACATGGGAAGCTCTTAATTGGAACTACAAAAACTTCGAATCAAAACACGGCTGGCGCCACGAGGCTGATAGCGGTTGTCCTGCCAGCACAGCACAGCAATTCCAGCAATTTCAGGTATTGCTGCAGAGATACATTGAGAATGAGCCCTATGAACATGGCAGAAGACCTGAGATTTATGCTAGGATGAGGCTCTTGGCACCAAAATTGCTTCTAGTCCCACAATGTCCAGATTGGGAGAATGATGAAAAGCATGGGAGTATGGAGAGTAGAATATCATCAGCGTCATTCCTGAAGATAATGGAGGATGGGATCCGAACATTCATGAAGTTTCTAAAGGCTGACAAAGAGAAACCATGTCAGATGGTGGCCGCTTACTTTTGGAGAAATCGGAGAATCACGGTTGATCCAACACTCCTCCGCCTAATCAAGAAAGTTAATCAAAAGAAGAGGAAGAAGGTGAAGGATGTTGGGTTGAGGAAGAGAAAGCTTAGAAAGGGTGAAGAAGAAGAGATGGATGTGTTAATGGCAATGATAGACTTGAAGGTGGTGTCGAGGGTGCTGAGAATGAAGGAGTTGAGCGAAGCGCAGTTGCATTGGTGTGAACACAAGATGAGCAAAGTTAGAATCGTCGCAGGGAAGCTTCAAACAGATTATTCCACTCCACTTTTCTTCCCTTCAATCTAA 1722 0.4257 MTCSKEVVLRVFNYASGYFHLLLNHVSTSFQLLFLFLFSLAIFLLTFSTFTGRFPLIQRDQQYEYVFSEDDEEEEEEAQQGYGHHTEKVRDHVAASSADSIHGRETLLFEEPQKKQHCSYSEEFATPRESLNEEDSEFIGRNDDSVSNSVSFASRPTSTITMNTYKCNKNSQADERVCVGRTTKNKKVQEAKLTRDDRFFIFDPTHQFQNKKLTVEDKHHDDDDDDGDSCIDGSSSTPRVSSEWRSSIHFKDSETEEALSSSSRRSCPKWESYTLFQKYDEEMSLLDRISAQKLEETEYLRSMEASPRSISERIASSVKKKAGDIGHNNPYGEGELEAAYVAQICLTWEALNWNYKNFESKHGWRHEADSGCPASTAQQFQQFQVLLQRYIENEPYEHGRRPEIYARMRLLAPKLLLVPQCPDWENDEKHGSMESRISSASFLKIMEDGIRTFMKFLKADKEKPCQMVAAYFWRNRRITVDPTLLRLIKKVNQKKRKKVKDVGLRKRKLRKGEEEEMDVLMAMIDLKVVSRVLRMKELSEAQLHWCEHKMSKVRIVAGKLQTDYSTPLFFPSI 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01980 573 MobiDBLite consensus disorder prediction 213 247 - -
Adu03g01980 573 Pfam Protein of unknown function (DUF1666) 335 571 IPR012870 -
Adu03g01980 573 PANTHER DNA LIGASE (DUF1666)-RELATED 22 141 - -
Adu03g01980 573 PANTHER DNA LIGASE (DUF1666)-RELATED 134 572 - -
Adu03g01980 573 PANTHER DUF1666 FAMILY PROTEIN 134 572 - -
Adu03g01980 573 PANTHER DUF1666 FAMILY PROTEIN 22 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01980 Adu-Chr3 36407842 36410515 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01980 - - gmx:100776190 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01980 03 36407842 36410515 Adu03g01980 03 36407842 36410515 ECH
Adu03g01980 03 36407842 36410515 Adu05g02631 05 93092454 93096240 PCT