Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01960 ATGAACCTTTGCGCGTCTTCCTTCAAATTCAACCTCCCCGGCTGCCGGCGCTGCTTGCGCTTGTCAAAACCCCTAATCTCTGCGTCTTTGACGGTGTCTCTGTTCTCCCATCAGAATCCTTCTTCGTCCACCGCAATGGCAGCTTCCATCACCACTGACACTTCGAAGCCCAAACAGATGGAGCCTTGGCTTATCGTCGGCCTCGGCAATCCCGGCAAGAAGTATTCTGCCACCCGCCACAATGTTGGTTTTGAGATGGTTGATACTATTGCCGAAGCTGAGGGGATACCTATGAGCAGTGTTTCCTTCAAAGCCTCCTTTGGAAAAGGTTTTATAGGTGATGTACCAGTTATACTTGCAAAACCACAAACTTTTATGAATGCAAGTGGGGAATCTGTTGGGGCCATAGTTTCGTATTTCAAGATTCCATTGAAGCAAGTAGTTGTGATCTTTGATGACATGGATTTGCCTTTTGCTAAATTGCGGCTGCTACCAAAGGGTGGACATGGAGGTCACAACGGAATGAAAAGTATAATTAATCACTTTAAAGGGAACACTGGTTTCCCCCGCTTAAGAATCGGCATTGGACGGCCTCCTGGGAAAATGGATCCTGCAGCATTTGTTCTTCGCCCTTTCACTAAGCAGGAAAGAGAAGAGTTGGACTTTACATTACAAGATGGATTAGAAGCAATGCGGATTCTTTTGCTAGAGGGATTTGATAAAAGTGCAACGTTTGTTAATAGTGCCAAAAAGATAGAGCAAATGGGTTGA 771 0.4565 MNLCASSFKFNLPGCRRCLRLSKPLISASLTVSLFSHQNPSSSTAMAASITTDTSKPKQMEPWLIVGLGNPGKKYSATRHNVGFEMVDTIAEAEGIPMSSVSFKASFGKGFIGDVPVILAKPQTFMNASGESVGAIVSYFKIPLKQVVVIFDDMDLPFAKLRLLPKGGHGGHNGMKSIINHFKGNTGFPRLRIGIGRPPGKMDPAAFVLRPFTKQEREELDFTLQDGLEAMRILLLEGFDKSATFVNSAKKIEQMG 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01960 256 Pfam Peptidyl-tRNA hydrolase 64 242 IPR001328 GO:0004045
Adu03g01960 256 Hamap Peptidyl-tRNA hydrolase [pth]. 62 240 IPR001328 GO:0004045
Adu03g01960 256 ProSitePatterns Peptidyl-tRNA hydrolase signature 1. 75 88 IPR018171 GO:0004045
Adu03g01960 256 PANTHER PEPTIDYL-TRNA HYDROLASE 30 250 IPR001328 GO:0004045
Adu03g01960 256 ProSitePatterns Peptidyl-tRNA hydrolase signature 2. 168 178 IPR018171 GO:0004045
Adu03g01960 256 PANTHER PEPTIDYL-TRNA HYDROLASE CHLOROPLASTIC 30 250 - -
Adu03g01960 256 Gene3D - 47 250 IPR036416 GO:0004045
Adu03g01960 256 SUPERFAMILY Peptidyl-tRNA hydrolase-like 62 247 IPR036416 GO:0004045
Adu03g01960 256 TIGRFAM pth: aminoacyl-tRNA hydrolase 64 243 IPR001328 GO:0004045
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01960 Adu-Chr3 35280555 35283128 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01960 K01056 - gmx:100526866 374.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01960 03 35280555 35283128 Adu03g01960 03 35280555 35283128 ECH