Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01957 ATGGCCTCCTCTGCGCCTCCCTCTTCCTCCTTCTTCGTCTCTTCCTCTTCCACCACCAAACGCCCTCCCTTTTTCTTTGCACCAACCTCCTTTAAATTCTATGCCCCCACTGCTTCTGATTCTAATTCTTCTTCCTCGTCTTCGTCACTCTCTTCTACTCGTCGGTGGTTCAATCCCCTGCGACGTAGAAAATTTGATCAGCCTCCCCAAATTGAGCGCCACTGGGTTGAGGCTCCTCATCAACCTCTCGCTTCCTCAGAAAGGTTCAGTGTGGCTTCTTACAACATACTTGCGGATAGAAACGCTTCTCAGCACAGAGATCTGTATGTAAATGTTCCTTCATATTATGTCAATTGGGATCGTCGTAAGAGAGTTATTTGCAAGGAACTCTTAGGATGGGATACTGACATTATCTGTTTACAAGAGGTGGACAAGTATATTGAACTCTCAAACATTCTAGTTAAAGCAGGATATACAGGATCGTACAAGAGACGCACTGGAGACACAGCTGATGGTTGTGCAATGTTTTGGAAAGCTGATAAGTTCCGGTTATTAGAATCAGAGAGCATTCAATTTAAGGACATGGGCCTTCGTGATAATGTTGCTCAACTTTTAGTTTTTGAGATGTGTGAATTTGATTCAAGAAGGCTGCTAGTTGGTAACATCCACGTACTTTATAACCCAAACAGGGGAGAAGTTAAATTAGGCCAAATTCGGTTTCTCTTAGCAAGAGCAAAGGCCCTCTCAGAGAAATGGGGTAATTCCCCTATTGTGCTAGCTGGTGATTTTAATAGTACTCCTCAGAGTGGAATATACAAGTTTTTATCATCATCTGAGCTTAATATTATGTTATATGACAGAAAGGAATTATCTGGACAAAAACGTTGCCGTCCTGCTCAAGTTTTAGGCAAGAAAAAAGAAACTGTTGGTCCATTTATCTTACTGGATGGATTGTTAAACTGCTGGACAGATGAAGAGGTAAAAGTTGCAACGGGTGATTCTGGGTGTCATTCAGCTGTGCATCCATTGAAGCTGAATAGTTCCTATGCTGCAATTGATGGTTCAACTAGTACACGGGGATTCAACGGTGAACCCTTTGCTACTTCCTATCACTCAAAGTTTCTTGGTACCGTAGATTATTTATGGTACTCAGACGGTATTTTACCTACAAAAGTTCTTGATACCGTTTCAATTGGTGATCTTGTGAGGACAGGTGGTCTCCCATGCAAGAAAGTGGGAAGCGACCATTTGGCCTTGGTTTCTGAGTTTTCCTTCTTAGATGCCAACAATGCATCTACAGAAATAGTTGCAGCATCAGCATCACCTAGACTAGATAATGAAGAACAGGACAAGTTGCAGTCATAA 1365 0.4227 MASSAPPSSSFFVSSSSTTKRPPFFFAPTSFKFYAPTASDSNSSSSSSSLSSTRRWFNPLRRRKFDQPPQIERHWVEAPHQPLASSERFSVASYNILADRNASQHRDLYVNVPSYYVNWDRRKRVICKELLGWDTDIICLQEVDKYIELSNILVKAGYTGSYKRRTGDTADGCAMFWKADKFRLLESESIQFKDMGLRDNVAQLLVFEMCEFDSRRLLVGNIHVLYNPNRGEVKLGQIRFLLARAKALSEKWGNSPIVLAGDFNSTPQSGIYKFLSSSELNIMLYDRKELSGQKRCRPAQVLGKKKETVGPFILLDGLLNCWTDEEVKVATGDSGCHSAVHPLKLNSSYAAIDGSTSTRGFNGEPFATSYHSKFLGTVDYLWYSDGILPTKVLDTVSIGDLVRTGGLPCKKVGSDHLALVSEFSFLDANNASTEIVAASASPRLDNEEQDKLQS 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01957 454 Gene3D Endonuclease/exonuclease/phosphatase 62 441 IPR036691 -
Adu03g01957 454 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 3 37 427 - -
Adu03g01957 454 Pfam Endonuclease/Exonuclease/phosphatase family 92 416 IPR005135 GO:0003824
Adu03g01957 454 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 37 427 - -
Adu03g01957 454 MobiDBLite consensus disorder prediction 1 21 - -
Adu03g01957 454 SUPERFAMILY DNase I-like 87 424 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01957 Adu-Chr3 35042227 35045653 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01957 89 277 EF-hand Containing Proteins AT5G54130 31.068 4.49e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01957 - - aip:107630317 869.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01957 03 35042227 35045653 Adu03g01957 03 35042227 35045653 ECH