Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01619 ATGAAGATTATTATTATTATGATTGGTATGTTTGTGTGCCTGATAGCACAGCTCTCTGTGAAGGTAGAATCAATAAGCAGAACAGATTTTCCAGATGGGTTTATTTTTGGAACTGCTTCTTCAGCTTTCCAGTTTGAAGGAGCTGTAGATGAAGGAAACAAAGGAGATAGCATATGGGATACCTTCTCAAGAATTCCAGGTATACAGAATATATATACATGTATTTTGATCTTAATAATAATATTGGACTTCAGTAATGCAGACACGGCTGTGGATCAATATCACCGATTTCAGGATGATATTGACTTGATGAAGGATTTGGGAATGGACTCTTACAGATTTTCCATATCTTGGTCAAGAATTTTCCCAAATGGATCAGGGGAACCAAATGCAGAGGGAATAAAATATTATAACAGCTTCATTGATGCTTTGCTGAAGAAAGGAATCCAGCCTTTTGTAACTCTGTATCATTGGGATCTTCCACAGATGCTTGAAGATCAATATGAAGGATGGATTAGCACACAAGTAATAAAAGATTTTGAGCATTATGCCTATACCTGCTTTGAAGCTTTTGGTGACAGAGTTAAGCATTGGATTACTTTCAACGAACCGCATAATTTCGCACTCCATGGGTACGATTTAGGCATTCAAGCACCTGGAAGGTGTTCGCTTTTGGGCCATCTTATATGTAAGAAGGGAAAATCATCAACTGAACCATACATTGTTGCTCACAACATTCTTCTATCTCATGCTGCTGCCTATCATTGTTACCAAATGCATTTTAAGGAAAGACAAGGAGGTCAAGTAGGAATAGCATTAGATGCTGTTTGGTATGAACCAATAACTGATCTTGATGAAGACAAAGATGCAGCATCAAGAGCCATGGACTTTTCACTTGGATGGTTCCTTGACCCACTTTTCTTTGGAAAGTATCCTCAAACAATGCAAGAACTTGTAGCTGAGAGATTACCAGAGATTTCTGATGCAGACTCAAACTTTCTTGTGGGATCCTTAGATTTTATTGGCATAAATCACTATACATCGATATATACTCGTAACGACAGGACCAGGATTCATAAATTCATAATGCAAGATGCTTCATCTGATGCAGCTGTCATTACAACTGGTAAGCTGTTAATGCAGTCTTGCATGTTTTTTCAGGCAGCATCAAGTTGGCTGCACATTGTGCCATGGGGCATCCGAAAGATAGTAAATTATGTGAATAGCAAATATGGTAACACACCTATAATTATAACAGAAAATGGAATGGATGACTCTAACATTATACCCTTTACGACCTTAGATAAGGCCTTAAATGATGAAAAGAGGATAAATTATCACCGGGACTATCTCTCTAATTTATCTGCAGCTATAAGGGAAGATGGCTGCAATGTTAAAGGTTACTTTGTGTGGTCGTTGCTTGACAATTGGGAATGGAATTCGGGCTACACTGTCCGGTTTGGACTCTACTACGTGGATTACAAGAATAACCTTACTAGGATACCGAAAGCTTCGGTGACATGGTTCAAAAACATGCTCAGATTAGAACGAGAAATGACAAGTCAAAGTTAA 1572 0.3817 MKIIIIMIGMFVCLIAQLSVKVESISRTDFPDGFIFGTASSAFQFEGAVDEGNKGDSIWDTFSRIPGIQNIYTCILILIIILDFSNADTAVDQYHRFQDDIDLMKDLGMDSYRFSISWSRIFPNGSGEPNAEGIKYYNSFIDALLKKGIQPFVTLYHWDLPQMLEDQYEGWISTQVIKDFEHYAYTCFEAFGDRVKHWITFNEPHNFALHGYDLGIQAPGRCSLLGHLICKKGKSSTEPYIVAHNILLSHAAAYHCYQMHFKERQGGQVGIALDAVWYEPITDLDEDKDAASRAMDFSLGWFLDPLFFGKYPQTMQELVAERLPEISDADSNFLVGSLDFIGINHYTSIYTRNDRTRIHKFIMQDASSDAAVITTGKLLMQSCMFFQAASSWLHIVPWGIRKIVNYVNSKYGNTPIIITENGMDDSNIIPFTTLDKALNDEKRINYHRDYLSNLSAAIREDGCNVKGYFVWSLLDNWEWNSGYTVRFGLYYVDYKNNLTRIPKASVTWFKNMLRLEREMTSQS 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01619 523 Pfam Glycosyl hydrolase family 1 28 514 IPR001360 GO:0004553|GO:0005975
Adu03g01619 523 PANTHER GLYCOSYL HYDROLASE 15 514 IPR001360 GO:0004553|GO:0005975
Adu03g01619 523 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 34 48 IPR033132 -
Adu03g01619 523 PANTHER BETA-GLUCOSIDASE 41-RELATED 15 514 - -
Adu03g01619 523 SUPERFAMILY (Trans)glycosidases 23 513 IPR017853 -
Adu03g01619 523 PRINTS Glycosyl hydrolase family 1 signature 440 451 IPR001360 GO:0004553|GO:0005975
Adu03g01619 523 PRINTS Glycosyl hydrolase family 1 signature 462 479 IPR001360 GO:0004553|GO:0005975
Adu03g01619 523 PRINTS Glycosyl hydrolase family 1 signature 337 351 IPR001360 GO:0004553|GO:0005975
Adu03g01619 523 PRINTS Glycosyl hydrolase family 1 signature 416 424 IPR001360 GO:0004553|GO:0005975
Adu03g01619 523 PRINTS Glycosyl hydrolase family 1 signature 486 498 IPR001360 GO:0004553|GO:0005975
Adu03g01619 523 Gene3D Glycosidases 12 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01619 Adu-Chr3 26197756 26202470 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01619 20 459 Glycoside Hydrolase AT5G54570 69.161 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01619 K01188 - gmx:100783543 858.596
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01619 03 26197756 26202470 Adu03g01619 03 26197756 26202470 ECH