Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01593 ATGGCTCCAGTTGCTCCTCGTTCCGGCGACGCCATCTTCGCTAACATCGAGCGTGTTAATGCGGAGCTTTTTACTCTAACGTATGGCGCGATTGTGCGTCAATTGCTCACGGATCTGGAAGAGGTTGAAGAGGTGAACAAGCAGCTTGAACAAATGGGTTATAACATTGGAATCCGTTTGATTGACGAATTTTTAGCAAAATCCAATGTCTCAAGGTGCGTTGATTTCAGAGAGACTGCTGATGTAATCGCAAAGGTTGGTTTTAAGATGTTCCTTGGTGTTACTGCATCTGTGAGCAACTGGGATGCTGAAGGTACATGTTGTAGTATCATTTTGGAGGATAATCCTTTGGTAGACTTTGTTGAGCTTCCTGACACCTGTCAAGGTCTTTACTATTGCAACATGTTAAGTGGTGTCATTAGAGGAGCCTTAGAGATGGTGTCAATGAAGACTGAGGTCACTTGGATCCGCGATGTGCTTCGAGGTGATGATGTGTTTGAGTTGCAGGTAAAACTTCTCAAGCAGGTCCCCGAGGAGTATCCATACAAGGATGATGAGTGA 561 0.4492 MAPVAPRSGDAIFANIERVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLEQMGYNIGIRLIDEFLAKSNVSRCVDFRETADVIAKVGFKMFLGVTASVSNWDAEGTCCSIILEDNPLVDFVELPDTCQGLYYCNMLSGVIRGALEMVSMKTEVTWIRDVLRGDDVFELQVKLLKQVPEEYPYKDDE 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01593 186 Gene3D Trafficking protein particle complex subunit 3 3 185 - -
Adu03g01593 186 CDD TRAPPC3_bet3 20 174 IPR016721 GO:0030008|GO:0048193
Adu03g01593 186 Pfam Transport protein particle (TRAPP) component 24 171 IPR007194 -
Adu03g01593 186 Coils Coil 32 52 - -
Adu03g01593 186 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3 1 186 IPR016721 GO:0030008|GO:0048193
Adu03g01593 186 SUPERFAMILY Ligand-binding domain in the NO signalling and Golgi transport 18 176 IPR024096 -
Adu03g01593 186 PANTHER PROTEIN PARTICLE COMPLEX SUBUNIT, PUTATIVE-RELATED 1 186 - -
Adu03g01593 186 PIRSF TRAPP_1_Bet3 3 185 IPR016721 GO:0030008|GO:0048193
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01593 Adu-Chr3 25465878 25468625 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01593 K20302 - jre:108993490 360.533