Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01567 ATGGCTCCAATTAGCAAAAACGTGCATGTTTTATTGGCTCTAGTGCTCATTATTCTTACAATTTGCACTTCCCATGTAATGTCCTCTCGAAAGTTCAATAATGAAGCATCATGGTCAATGTACCAAAGACATGAGCAATGGATGTTAGAATATGGCATAGTGTACAAGAATGGTGAGGAGAAGGAGAAACGTTTCTTGATATTCAAGGACAACGTTGAATTGATAGAGTCATTTAACGCTGCTGGGAACAAGCCTTACAAGCTTGGTGTTAATCACTTAGCTGATCTTACCAATGAGGAATTCAAGGCTTCACGTAATGGATACATGAGATCAAATAATTCACCTCCAACATCATTCAAGTATGAAAATGTCACTGATGTTCCAAATGCAATTGACTGGAGGCAGAATGGAGCTGTTACTCCAGTCAAGAACCAAGGCAGTTGCGGATGTTGTTGGGCATTTTCAACCGTTGCTGCAACCGAAGGCATCCACCAGATTACTACAGGCAACCTTGTGTCCCTCTCAGAGCAAGAGCTTGTGGACTGTGATAACGTGGATCAAGGTTGCGAGGGAGGTCTCATGGAAAATGGCTTTGAATTCATCATAAAAAATGGTGGAATCACCACTGAGTCAAACTACCCTTACAAAGGAGTTGATGAAACTTGTGACACAAGTGAAGAGGCTTCTCCAGCAGCTCAGATAAAAGGGTACCAGCGGGTGCCTGCAAACAGCGAGCACGCACTTCAACAAGCCGTGGCGAACCAACCGGTTTCTGTTTCCATTGATGCTAGTGGATCTGCTTTCCAATTCTACTCGAGTGGCGTCTTCACCGGTGAATGTGGGACTCAACTTGACCATGGTGTTACTGCAGTTGGTTACGGTGCAGATGATGATGGTACTGAGTATTGGATAGTAAAAAATTCATGGGGCACACAATGGGGCGAGGATGGTTACATAAGAATGAAGAAGGGAATAGATGCTACTGAAGGGTTGTGTGGCATTGCTATGGATGCCTCTTATCCCACTGCTTAA 1032 0.439 MAPISKNVHVLLALVLIILTICTSHVMSSRKFNNEASWSMYQRHEQWMLEYGIVYKNGEEKEKRFLIFKDNVELIESFNAAGNKPYKLGVNHLADLTNEEFKASRNGYMRSNNSPPTSFKYENVTDVPNAIDWRQNGAVTPVKNQGSCGCCWAFSTVAATEGIHQITTGNLVSLSEQELVDCDNVDQGCEGGLMENGFEFIIKNGGITTESNYPYKGVDETCDTSEEASPAAQIKGYQRVPANSEHALQQAVANQPVSVSIDASGSAFQFYSSGVFTGECGTQLDHGVTAVGYGADDDGTEYWIVKNSWGTQWGEDGYIRMKKGIDATEGLCGIAMDASYPTA 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01567 343 PRINTS Papain cysteine protease (C1) family signature 145 160 IPR000668 GO:0006508|GO:0008234
Adu03g01567 343 PRINTS Papain cysteine protease (C1) family signature 286 296 IPR000668 GO:0006508|GO:0008234
Adu03g01567 343 PRINTS Papain cysteine protease (C1) family signature 302 308 IPR000668 GO:0006508|GO:0008234
Adu03g01567 343 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 284 294 IPR025660 -
Adu03g01567 343 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 145 156 IPR000169 -
Adu03g01567 343 SMART Inhibitor_I29_2 44 101 IPR013201 -
Adu03g01567 343 SMART pept_c1 127 342 IPR000668 GO:0006508|GO:0008234
Adu03g01567 343 Pfam Papain family cysteine protease 127 342 IPR000668 GO:0006508|GO:0008234
Adu03g01567 343 Pfam Cathepsin propeptide inhibitor domain (I29) 44 101 IPR013201 -
Adu03g01567 343 Gene3D Cysteine proteinases 19 343 - -
Adu03g01567 343 PANTHER SENESCENCE-ASSOCIATED GENE 12 34 342 - -
Adu03g01567 343 CDD Peptidase_C1A 128 341 IPR039417 -
Adu03g01567 343 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 34 342 - -
Adu03g01567 343 SUPERFAMILY Cysteine proteinases 37 342 IPR038765 -
Adu03g01567 343 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 302 321 IPR025661 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01567 Adu-Chr3 24770456 24772993 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01567 - - gmx:100815212 524.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01567 03 24770456 24772993 Adu03g01567 03 24770456 24772993 ECH