Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01566 ATGTCACGCAGGCTATTTGAGTCTACATGCACAAGAGAGAGACATGAGAAATGGATGGAAGAATATGGAAAAGTGTATAAGGATGGTGAAGAGAAAGAAAGAAGGTTCCGAATATTCAAGAACAATGTTGAGTTCATTGAGTCCTTCAATGCGGCTGGGGACAAAAGTTTCAAGCTTAGTGTTAACAGATTTGCGGACCTAAGCGTTGAAGAGTTCAAGGCTTCTCTTAATGGCCTTCCCAAGAGTCATTGGCAAACGACGCCGTTCCGGCATGAGAATGTAACTGACATTCCAGAAACCGTGGACTGGAGGAAAAGAGGAGTTGTTACACCAATCAAGGACCAAGGCACATGTGGTAGTTGGTGGGCATTTTCATCTGTAGCTGCAGTTGAAGGAATCCACAAAATAAGTACAGGTAAACTAGTGTCTCTCTCAGTGCAAGAACTAGTAGATTGCGTAAGAGGCGACGGTGAAGGATGCTATGGTGGTTATATGGAAGATGCGTATACATTCATTGCAAAGAATGGAGGAATATCAAGTGAATCAGACTACCCATACAAACAAGTTGAGAAGCCATGTAAGGCTAATGAGAAGGAAACAATACATAATGTAGCTAAGATTAAAGGGTTCGAGAAGGTTCCTTCTAATAACGAAAAGGCACTCCTCAAAGCTGTGGCAAAACAACCAGTGTCGGTTTATCTTCAAGCTAGTGGGTATTATTTTCAATTTTATTCTAGTGGGATTTTCACTGGAATATGTGAAACTGAGCCAGACCATACTGCTACGGTAGTTGGTTATGGTAAAGATAAGGATGGTACCAAGTATTGGATAGTAAAAAATTCATGGGGTACTGACTGGGGAGAAAAAGGGTACATAAGGATGAAGAGAGAGGTACATGCTAAGGAAGGGTTATGTGGAATTGCCAATAATGTCACGTATCCAATTATTTAA 951 0.4111 MSRRLFESTCTRERHEKWMEEYGKVYKDGEEKERRFRIFKNNVEFIESFNAAGDKSFKLSVNRFADLSVEEFKASLNGLPKSHWQTTPFRHENVTDIPETVDWRKRGVVTPIKDQGTCGSWWAFSSVAAVEGIHKISTGKLVSLSVQELVDCVRGDGEGCYGGYMEDAYTFIAKNGGISSESDYPYKQVEKPCKANEKETIHNVAKIKGFEKVPSNNEKALLKAVAKQPVSVYLQASGYYFQFYSSGIFTGICETEPDHTATVVGYGKDKDGTKYWIVKNSWGTDWGEKGYIRMKREVHAKEGLCGIANNVTYPII 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01566 316 Gene3D Cysteine proteinases 3 316 - -
Adu03g01566 316 CDD Peptidase_C1A 98 314 IPR039417 -
Adu03g01566 316 PANTHER SENESCENCE-ASSOCIATED GENE 12 7 315 - -
Adu03g01566 316 Pfam Papain family cysteine protease 97 315 IPR000668 GO:0006508|GO:0008234
Adu03g01566 316 SMART Inhibitor_I29_2 15 72 IPR013201 -
Adu03g01566 316 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 275 294 IPR025661 -
Adu03g01566 316 PRINTS Papain cysteine protease (C1) family signature 259 269 IPR000668 GO:0006508|GO:0008234
Adu03g01566 316 PRINTS Papain cysteine protease (C1) family signature 275 281 IPR000668 GO:0006508|GO:0008234
Adu03g01566 316 PRINTS Papain cysteine protease (C1) family signature 115 130 IPR000668 GO:0006508|GO:0008234
Adu03g01566 316 Pfam Cathepsin propeptide inhibitor domain (I29) 15 72 IPR013201 -
Adu03g01566 316 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 7 315 - -
Adu03g01566 316 SMART pept_c1 97 315 IPR000668 GO:0006508|GO:0008234
Adu03g01566 316 SUPERFAMILY Cysteine proteinases 11 315 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01566 Adu-Chr3 24756985 24759691 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01566 - - gmx:113001896 440.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01566 03 24756985 24759691 Adu03g01566 03 24756985 24759691 ECH