Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01565 ATGTCACGCAGGCTATTTGAGTCTACATGCACAAGAGAGAGACATGAGAAATGGATGGAAGAATATGGAAAAGTGTATAAGGATGGTGAAGAGAAAGAAAGAAGGTTCCGAATATTCAAGAACAATGTTGAGTTCATTGAGTCCTTCAATGCTGCTGGGGACAAAAGTTTCAAGCTTAGTGTTAACAGATTTGCGGACCTAAGCGTTGAAGAGTTCAAGGCTTCTCTTAATGGCCTTCCCAAGAGTCATTGGCAAACGACGCCGTTTCGGCATGAGAATGTAACTGACATTCCAGAAACTGTGGACTGGAGGAAAAGAGGAGTTGTTACACCAATCAAGGACCAAGGCGGATGTTATAGTTGTTGGGCATTTTCAACTGTGGCCTCAATTGAAGGTATTCACAAAATAACTACAGGTAAATTGGTGTCTCTCTCAGAGCAAGAACTAGTAGATTGTGTCAGAGGCGACACAACAGGATGCAAAGGTGGTTATATGAAAGACGCATTTAGATTCATTGTAAAGAAAGGAGGAATAACGAGTGAGTCAAACTACCCTTACAAAGGAGTTGATAAGACTTGTAAGGCAAATGAGAAGGAAACAAGAAAACACAATGTAGCTAAGATTAAAGGGTTCGAGAAGGTTCCTTCCAATAACGAAAAGGCTCTTCTCAAAGCTGTGGCAAAACAACCAGTGTCGGTTTATGTTCAAGCTGGTGGGGATGATTTTCAATTTTATTCCAGTGGTATTTTTACTGGGAAGTGTGGAATTGAGCCAGATCATGCCGTTACGGTAGTTGGTTATGGTAAAGCTAAGGATGGTACTAAGTATTGGATAATAAAGAATTCATGGGGTACTGATTGGGGAGAGAAAGGGTACATGAGGATAGAGAGAGATATTCATGCCAAAGAAGGGTTATGCGGAATTGCCAACAATCCCTAG 939 0.4121 MSRRLFESTCTRERHEKWMEEYGKVYKDGEEKERRFRIFKNNVEFIESFNAAGDKSFKLSVNRFADLSVEEFKASLNGLPKSHWQTTPFRHENVTDIPETVDWRKRGVVTPIKDQGGCYSCWAFSTVASIEGIHKITTGKLVSLSEQELVDCVRGDTTGCKGGYMKDAFRFIVKKGGITSESNYPYKGVDKTCKANEKETRKHNVAKIKGFEKVPSNNEKALLKAVAKQPVSVYVQAGGDDFQFYSSGIFTGKCGIEPDHAVTVVGYGKAKDGTKYWIIKNSWGTDWGEKGYMRIERDIHAKEGLCGIANNP 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01565 312 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 276 295 IPR025661 -
Adu03g01565 312 PRINTS Papain cysteine protease (C1) family signature 276 282 IPR000668 GO:0006508|GO:0008234
Adu03g01565 312 PRINTS Papain cysteine protease (C1) family signature 115 130 IPR000668 GO:0006508|GO:0008234
Adu03g01565 312 PRINTS Papain cysteine protease (C1) family signature 260 270 IPR000668 GO:0006508|GO:0008234
Adu03g01565 312 Pfam Cathepsin propeptide inhibitor domain (I29) 15 72 IPR013201 -
Adu03g01565 312 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 7 311 - -
Adu03g01565 312 CDD Peptidase_C1A 98 312 IPR039417 -
Adu03g01565 312 PANTHER SENESCENCE-ASSOCIATED GENE 12 7 311 - -
Adu03g01565 312 SMART Inhibitor_I29_2 15 72 IPR013201 -
Adu03g01565 312 Pfam Papain family cysteine protease 97 311 IPR000668 GO:0006508|GO:0008234
Adu03g01565 312 Gene3D Cysteine proteinases 3 312 - -
Adu03g01565 312 SMART pept_c1 97 312 IPR000668 GO:0006508|GO:0008234
Adu03g01565 312 SUPERFAMILY Cysteine proteinases 11 310 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01565 Adu-Chr3 24705729 24707409 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01565 - K16292 gmx:113001896 455.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01565 03 24705729 24707409 Adu03g01565 03 24705729 24707409 ECH