Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01401 ATGGAAGTGGAAGTTGTAGACTGGAGACAAAATTGCCATGAGAGGCTAGAGATCTTGAAGAATAAACAGTTTCCCATTTTTCAAGATGTTTCAGCTTCACAAGATGGAATGACGTTGCAACAAAGGCTTCCCGAAGAAGTAAACATTTTGAGCTTTGAGTTGTATAAAGCTATTGAAAATGAAAATGCCGACATGTTTATTGATGAATTGGAGAAAGTATCTGCCAGAAAAAAGCTACCTCTGTCAGATATTTTTGAGCAAGTCACATTGGCAGGTGATTCCATGCTTCATGTGGCATCAGATATGGGGAAAGGACGCATTACAGAATTGATTTTACATCACTTCCCTAATCTTCTTAACAAGAGAAACATTAGAGGCGACACTCCTCTTCATGTTGCTGCTAGATCTAACAAGAATCTTCGTCTAGTCAAAGTGATTCTCACCCAATACGCAAATGATAAGTCTAGATATGAGTTGGAGGATGAACTAACACGGTTAACGAATGAATATGGCAACACTGCTTTGCACGAAGCGGTTTATAGCAAGGATCCTGCTGTTGTTACTGAACTTTTGAATGCAGATGGGGCTGTCATCAATCATTCAAACAAGTCAGGCAGATTGCCACTACACTTGGCAATTGAGATTGGAAATGTAAAAATCTGTCGCCTTCTATTGAAAACTCCATTCCCTGTGAATGATTCTTTTCATCAATGCCATCCCCTTCACACCGTCATAATAAAAAGGAATCTTGCTCTTATAAGGATAATACTAGCAAACAGACCAGAGCTCATATCTTTAAGAGATGAAGATGGAGAGACTGCACTTCATTTTGCTGCCTATGTTGGTTTTGTTGAATGTGCTCAAATATTGTTGAAATCATCTGCTTTAACCGGTATGGAGCAAAACAAAAAAGGCAATCTTCCTATTCATCTTGCTTGTGAAAAGGGCCGTGTTGAGGTGGTCAAAGAATTGCTTCAACAAGAGTGGCCTAGCCCTAAAGTATGTCTTAATCAGAAGGGTCAAAACATTTTGCACATTGCAGCCAAGAATGGAAAAGCTAATTTGTTGAAGTACTTACTAAGAAACAAGAAGATTGAACCGTTCACCATAAATGAGAAAGACAAGAACGGAAATACCCCATTACATTTGGCTGCAAAAAATTTATTCCCCGAGGTTTTGTTCGTGATGACCGGAGATGAAAGAGTGAAGCTAAACTACGTCAACAATGACGGTCTAACTGCCCTTGATATTGTCTGGTTTCATCTCAGCCTAAGAGCAACACCAAGAGAGAAGCTCTCATATTGGACATTAAGAAAATCTGGAGCTTCGTGTTCAATGAGAGCATATAAATTGCATCGGTCACGTTCAGAATCACCCCAAATAGGCATAAAATATGACCAACAAACGGTCAACATATATTTGATTGTGAGTACACTATTGGTCACAGTTACATTTAGTGCAGCTTTTAGTGTTCCAGGTGGTGTTTATAGTTCTGATGACCCAAACCCACACAATAGAGGAATGGCAGTCCTGGCTAACAAAAAATTGTTCAAGATGTTCACGATCTTCAACACCATAGCTATGTATTGCTCCACAATTGGATCTATGATGTTTTTGTGGGAACGACTTGGGGATGACCGTGTTGCACAGGTGGCTTTCGATTATGCAATGCTTTTTATGTGTTTCGGTGTCATGTCAGTTGCTTTGGCATTTGCATTTGCTGTATGTCTAACCGTCAGCAATGACTCCTTTCTTGCAATTGTTATAACTGTCCTTGCCATTTCCTTCATTTCCATTATCATCTCTATGGGTGTTATAGCATTTTACCCATATAGAGTTCGCAACCCTCTTGTGCGTCGAGTTAACAGATTCCTTATTTGGTTTAGCTGTAAATTTTGTCAATACACTGATAGACCTAAAAAGTTAGATACTCGGGAAAGGAACAAGGATGCAGAAAAGAACGAGTGA 1968 0.3938 MEVEVVDWRQNCHERLEILKNKQFPIFQDVSASQDGMTLQQRLPEEVNILSFELYKAIENENADMFIDELEKVSARKKLPLSDIFEQVTLAGDSMLHVASDMGKGRITELILHHFPNLLNKRNIRGDTPLHVAARSNKNLRLVKVILTQYANDKSRYELEDELTRLTNEYGNTALHEAVYSKDPAVVTELLNADGAVINHSNKSGRLPLHLAIEIGNVKICRLLLKTPFPVNDSFHQCHPLHTVIIKRNLALIRIILANRPELISLRDEDGETALHFAAYVGFVECAQILLKSSALTGMEQNKKGNLPIHLACEKGRVEVVKELLQQEWPSPKVCLNQKGQNILHIAAKNGKANLLKYLLRNKKIEPFTINEKDKNGNTPLHLAAKNLFPEVLFVMTGDERVKLNYVNNDGLTALDIVWFHLSLRATPREKLSYWTLRKSGASCSMRAYKLHRSRSESPQIGIKYDQQTVNIYLIVSTLLVTVTFSAAFSVPGGVYSSDDPNPHNRGMAVLANKKLFKMFTIFNTIAMYCSTIGSMMFLWERLGDDRVAQVAFDYAMLFMCFGVMSVALAFAFAVCLTVSNDSFLAIVITVLAISFISIIISMGVIAFYPYRVRNPLVRRVNRFLIWFSCKFCQYTDRPKKLDTRERNKDAEKNE 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01401 655 ProSiteProfiles Ankyrin repeat region circular profile. 125 152 - -
Adu03g01401 655 ProSiteProfiles Ankyrin repeat profile. 304 326 IPR002110 GO:0005515
Adu03g01401 655 ProSiteProfiles Ankyrin repeat profile. 204 226 IPR002110 GO:0005515
Adu03g01401 655 ProSiteProfiles Ankyrin repeat profile. 270 302 IPR002110 GO:0005515
Adu03g01401 655 ProSiteProfiles Ankyrin repeat region circular profile. 339 362 - -
Adu03g01401 655 Gene3D - 259 421 IPR036770 -
Adu03g01401 655 ProSiteProfiles Ankyrin repeat region circular profile. 270 295 - -
Adu03g01401 655 Pfam Domain of unknown function 467 577 IPR026961 -
Adu03g01401 655 Pfam Ankyrin repeats (3 copies) 302 365 IPR002110 GO:0005515
Adu03g01401 655 Pfam Ankyrin repeats (3 copies) 209 294 IPR002110 GO:0005515
Adu03g01401 655 PANTHER ANKYRIN REPEAT PROTEIN-LIKE 53 548 - -
Adu03g01401 655 Pfam Ankyrin repeat 170 201 IPR002110 GO:0005515
Adu03g01401 655 Pfam Ankyrin repeat 126 152 IPR002110 GO:0005515
Adu03g01401 655 ProSiteProfiles Ankyrin repeat region circular profile. 304 326 - -
Adu03g01401 655 SUPERFAMILY Ankyrin repeat 168 417 IPR036770 -
Adu03g01401 655 Gene3D - 9 258 IPR036770 -
Adu03g01401 655 ProSiteProfiles Ankyrin repeat profile. 125 158 IPR002110 GO:0005515
Adu03g01401 655 ProSiteProfiles Ankyrin repeat region circular profile. 204 226 - -
Adu03g01401 655 PANTHER MOLTING PROTEIN MLT-4 53 548 - -
Adu03g01401 655 SMART ANK_2a 170 200 IPR002110 GO:0005515
Adu03g01401 655 SMART ANK_2a 376 406 IPR002110 GO:0005515
Adu03g01401 655 SMART ANK_2a 204 233 IPR002110 GO:0005515
Adu03g01401 655 SMART ANK_2a 91 120 IPR002110 GO:0005515
Adu03g01401 655 SMART ANK_2a 270 303 IPR002110 GO:0005515
Adu03g01401 655 SMART ANK_2a 236 266 IPR002110 GO:0005515
Adu03g01401 655 SMART ANK_2a 125 156 IPR002110 GO:0005515
Adu03g01401 655 SMART ANK_2a 339 372 IPR002110 GO:0005515
Adu03g01401 655 SMART ANK_2a 304 334 IPR002110 GO:0005515
Adu03g01401 655 SUPERFAMILY Pseudo ankyrin repeat-like 51 204 - -
Adu03g01401 655 ProSiteProfiles Ankyrin repeat profile. 339 362 IPR002110 GO:0005515
Adu03g01401 655 ProSiteProfiles Ankyrin repeat profile. 170 203 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01401 Adu-Chr3 20852473 20856538 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01401 125 620 Miscellaneous Gene Families AT5G60070 25.440 1.44e-29 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01401 - - adu:107477925 1288.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01401 03 20852473 20856538 Adu03g01401 03 20852473 20856538 ECH