Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Adu03g01399 | ATGGTGAGGGTTCTGAGGAGCTGCATTCAATCGATATTGAAGATGGTCAACTCGTTTATTGGAATGGCTGGAATAGCCATGATTCTCTATTCTGCGTGGATGATCAGGATTTGGCAGAGGGAGATGGGTGAGCTTCCATTTGGTTCGGATTCTAAATATCCACCTCCCTGGTTCATTTACACATTTCTTTTCCTTGGAGTTGTGTTCTGTATGATCACCTGTACTGGTCATGTTGCTGCTGAAACTGCCAATGGCTGTTGCTTGTATATGTATATGGTGTTCATGGTTATCCTTATAATGCTGGAAGCTTCATTAGCAGTTGATGTGTTTTTACACTCAGACTGGGAGAAGGACTTTCCAATCGACCCCACAGGCAACTTTGACCAGTTCCAGAAATTCGTAAAATCAAACTTTGAGATGTGCAAATGGGTTGGTCTGTCACTTGTTGCTCTGCAGCAGGGCCTCTCTTTGCTAATATCAATGATTCTCAAAGGTCTTGGGCCACATCAATCCTATGACAGTGATGATGAGTATGGCCCTGACAGGGTGCCGCTCTTGAAGAATGCTCCGCCTTATGCTAAAAATGAAGCATGGCTTAGGATTAATGACAAGGCAAATAGagtatttgttggagaagcgaagtacagaaggggAGCGGCGAGCCAGAATGCAAGGGGCAAAGAAGCAAAGGACAACACCAGGGAGACTGATAAAGGATGCAACCCACTGAACAGAAGTGCGAAGGCAGCAGAAGAGAAATTGGTAAGGCAGCAGCATGATGGGAACATCAAATATCCAAATAAAAATGAATGCACAAAGAAGGTAGAAATCCATATAGTCAATGAGAATGTCGTCTGGCTACAAAGGAGCATCGTGGGAGATACGAAGTTGGCGATCAATTTTAATGTACTGCAGCAAAAGATTCATAATGTATTGCCAGGTGTAACACACGTAAGGGAGCTGGGAGCATATAAAGGAATGATAACGTTCGACTCTGTGCTCAGTGCTGAAGAAGCATACACCTTTAGAATGAACGTTTTATTAAAAATGTTTTATCGGGTATGGAGATGGGATGAAACGGAGAGAAGCGAGTCTAGAAGAGTTTGGTTGGAGTGCTTTGGAGTTCCATTACATGCATGGTCAACGGACACTTTTCGCAGAATTGGAGAACAATGGGGTGATGTGATACACATTACAATAGGAGGAAGTGGTTTTGACGTCCTTGTAAGAGAAGTGGGGGGAGAAGTATATCGAGAGGAATGCTTTGGGAAGAGGGAGGATGAGACAATGGATAGGTGTATAGCAGATGGAGGAGGATTGCAGAATGAACAGCTTGTCGGCACTGTAAACAATGGCCATAAACGACCGGAGGTGGCATGGGACCAGGTGGCTATTCTGATATCGGTGGACAATCATTCTGTTGAAAAAGAAAAGGACAGAATGGAGGCTAAGGATTCTCAGGGATCCTCTCATATTAACGGTGGGGCGGATTCAGAGGAAACAACATCTTGTGATTTTAATCAGCATAATGGAAGCCAAAGCTATGTTGGCAATTGTTTTGATCCTGGGCTGGTTGCTACAAGGCCCACTAAGGGAATTACAGGGAACGGACCATATGGAGCTAAGGGGGCATTGTTGGGTCGTTGGAGTAGGGCTAGCAAGGAATCCCCAAACCGGGTAGCAGCTGACCCGGTTTCCTTGCTGACCCGAAACGAGAAGGGGAGCCTAGCGCACGGTCCAGCCATCGCGGCACACCCATCCTCATCTACAGTTGGCCTTGGATCACGACACCGCAGGGAGGAGAACCATGGACAACCCGATTTGGCAACAGGGGAATTTGCCACTGTGTTGTCTTGGTTAGGAGTAACAACGCAGATCGGGGGTGTGGTGGGAGAGCAGCCTGGTCGGGTGAGGGCTGACGGGAAGGGATCGCGGCAGTCTGTGGATGAGATCTGTGGTCTGAGACTCGCACTGGAGAAGGCTGCGCGGGAGACGGAGATGACGCGGCCTGCGGGAGGAACCGGGAGGAATGGTGCAGCCATGAATGATACGGGTGAAGGAGGGCGGTGGCCACAAGGAAGGGAGATGCACACCGGTCCGATCCATGAAGAACGAACCTGCGAATCACAAGACAGAGTTCGGCTACTTGAGGATGAGGGATATGGCAATGTCAATGGGCTTTTGATGGGTTGCAAGGCAGCAGAGGAGAACCAGCTCTCTGGAGGTGTTACAGGGTCGGGACCGGAGGAGGGGGAAATTGTGATGGAGAGCGAGGAAGGGGTGAATGCTAGGGAACAAGAGGAACAACAGACTATCTGCACACAACCAGGAACAGAGAGGGAAGCTACCATGgatggtggcactgatatgcagaataaaaaccaaagaccaagttgggaagaggagatgactgagaataaagaggcatga | 2430 | 0.4621 | MVRVLRSCIQSILKMVNSFIGMAGIAMILYSAWMIRIWQREMGELPFGSDSKYPPPWFIYTFLFLGVVFCMITCTGHVAAETANGCCLYMYMVFMVILIMLEASLAVDVFLHSDWEKDFPIDPTGNFDQFQKFVKSNFEMCKWVGLSLVALQQGLSLLISMILKGLGPHQSYDSDDEYGPDRVPLLKNAPPYAKNEAWLRINDKANRVFVGEAKYRRGAASQNARGKEAKDNTRETDKGCNPLNRSAKAAEEKLVRQQHDGNIKYPNKNECTKKVEIHIVNENVVWLQRSIVGDTKLAINFNVLQQKIHNVLPGVTHVRELGAYKGMITFDSVLSAEEAYTFRMNVLLKMFYRVWRWDETERSESRRVWLECFGVPLHAWSTDTFRRIGEQWGDVIHITIGGSGFDVLVREVGGEVYREECFGKREDETMDRCIADGGGLQNEQLVGTVNNGHKRPEVAWDQVAILISVDNHSVEKEKDRMEAKDSQGSSHINGGADSEETTSCDFNQHNGSQSYVGNCFDPGLVATRPTKGITGNGPYGAKGALLGRWSRASKESPNRVAADPVSLLTRNEKGSLAHGPAIAAHPSSSTVGLGSRHRREENHGQPDLATGEFATVLSWLGVTTQIGGVVGEQPGRVRADGKGSRQSVDEICGLRLALEKAARETEMTRPAGGTGRNGAAMNDTGEGGRWPQGREMHTGPIHEERTCESQDRVRLLEDEGYGNVNGLLMGCKAAEENQLSGGVTGSGPEEGEIVMESEEGVNAREQEEQQTICTQPGTEREATMDGGTDMQNKNQRPSWEEEMTENKEA | 809 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Adu03g01399 | 809 | MobiDBLite | consensus disorder prediction | 662 | 697 | - | - | |
| Adu03g01399 | 809 | PANTHER | TETRASPANIN-19 | 3 | 193 | - | - | |
| Adu03g01399 | 809 | MobiDBLite | consensus disorder prediction | 220 | 243 | - | - | |
| Adu03g01399 | 809 | MobiDBLite | consensus disorder prediction | 487 | 507 | - | - | |
| Adu03g01399 | 809 | MobiDBLite | consensus disorder prediction | 474 | 507 | - | - | |
| Adu03g01399 | 809 | Pfam | Domain of unknown function (DUF4283) | 287 | 398 | IPR025558 | - | |
| Adu03g01399 | 809 | MobiDBLite | consensus disorder prediction | 757 | 809 | - | - | |
| Adu03g01399 | 809 | MobiDBLite | consensus disorder prediction | 221 | 238 | - | - | |
| Adu03g01399 | 809 | MobiDBLite | consensus disorder prediction | 795 | 809 | - | - | |
| Adu03g01399 | 809 | PANTHER | TETRASPANIN | 3 | 193 | IPR018499 | GO:0016021 | |
| Adu03g01399 | 809 | Pfam | Tetraspanin family | 12 | 115 | IPR018499 | GO:0016021 | |
| Adu03g01399 | 809 | MobiDBLite | consensus disorder prediction | 578 | 606 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Adu03g01399 | Adu-Chr3 | 20836209 | 20842865 | Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Adu03g01399 | - | - | aprc:113858288 | 342.813 |