Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01351 ATGTATAAGAAAAAGACTAGTGATTTCACGGACTCAGTTACCTCCTCGTCCTCAATTTCTGTTCATCCCAAAAATGGAAAAGTCGTTACTTCCCGCTTCATGTCTTCTCCTTCGCTTGCTGATCATATAACCAATGATAGGCTCAGAGACAAAGAGCATCACAAATCCACCAACAGCAACACATCTTCAACCTCCGCTTCCTCTCTTACCAGGCAAAAATCCAAGAACCATGTTAACAGCGCTTCTTCCAAAGAGAACGATGGACCCTCTTTTGCTGCTTCTCTAAGGAACATTGTAAAATTTGCTTCCTCGTCACCGTCTACTGTTATATCATCACCATCATCTTCCTCTTCCTCGGTGAAGAAACAAAGTTCCAACGATACATTATGCATTGGTCCGGCAAGGTTATCTCTGGATCAAAATGCGTTGTACAAGAAATCCTTGTCTTCTTCACGTAGAAACCACCAAGATTACTATTCTAACGTCTCGAATTCAGTTGAATCGGAACCTGGTTATTTCAATTCTCCATCAAGAACTACATCATCTAGAAAACTTGGTAGAGAGGTTCCTTCCAAGTACATGGTGATGACCACTGATGCAGCATCGTTCGACGAGTCCATGCTATCAACGGCGAAGAACGAGAACACAATGTTGCAGAAAAGCAGCTCTATAAAGAGGGTAAACTCGCTTGTTAATGGGTACAAGAGTTCAATGTCTCAGTGGGCGTTATCTCCTGGGAGATCAGGGTCACCAACTATGTGTGTGGACAAGAAGGATAAACTACCGTCTTCGTTTTCGAGCTTGAGGCCTCAGAAGAATAATAAGAGCGTGGAGAAGATTCTGAGCATGGGTTTTGATCTATTCAGGACAAAGAAATCTTCTTCTTCTTCTAACTCTGAGGATCTTCATTTGCTACGCTTGCTTGATAATCGTTTCATGCAGTGGCGGTTCGCTAATGCTAGAGCTCAGGTTGTGAACGAAAATCTTACTCATACGGTTCAGAGTAATTTAATATGTGCTTTGGATGGTCTGACAAAGTTGAGAAATTCAGTGATGCAAAAGAAGATACAGCTTGAGAGGGAAAAGCTTAGGATGAAGCTCAACCTTGTACTACGTTCTCAAATGAAGCTATTGGAAACATGGGGAGCTATGGAAAGGCAACACATGGCAGAAATTGCTGCAATGAAGGACTGCTTGCATTCTGTTGTTTGTAAAGTTCCGCTTTTGGAAGGCGCAACGGTGGACATACAATCAGCATTCATTGCTGAGCGGCAAGCATCTGATCTCACAGATTCCATCAACTTAATGTTAAATAGTTTTTCACTGCCGGCTTATAAGACTGCTGAGTTAGTATCAGAATTAGCAGAAGTTGTTGCACAAGAGAAGTTGCTCATAGAAGAATTCTATGACCTTTTCCATGCCGTACGTGTCCTTGAGCTCAGAGAAAGAAGCTTGAAGTGCAGCCTCATTCAACTTCAATGA 1482 0.4224 MYKKKTSDFTDSVTSSSSISVHPKNGKVVTSRFMSSPSLADHITNDRLRDKEHHKSTNSNTSSTSASSLTRQKSKNHVNSASSKENDGPSFAASLRNIVKFASSSPSTVISSPSSSSSSVKKQSSNDTLCIGPARLSLDQNALYKKSLSSSRRNHQDYYSNVSNSVESEPGYFNSPSRTTSSRKLGREVPSKYMVMTTDAASFDESMLSTAKNENTMLQKSSSIKRVNSLVNGYKSSMSQWALSPGRSGSPTMCVDKKDKLPSSFSSLRPQKNNKSVEKILSMGFDLFRTKKSSSSSNSEDLHLLRLLDNRFMQWRFANARAQVVNENLTHTVQSNLICALDGLTKLRNSVMQKKIQLEREKLRMKLNLVLRSQMKLLETWGAMERQHMAEIAAMKDCLHSVVCKVPLLEGATVDIQSAFIAERQASDLTDSINLMLNSFSLPAYKTAELVSELAEVVAQEKLLIEEFYDLFHAVRVLELRERSLKCSLIQLQ 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01351 493 PANTHER QWRF MOTIF PROTEIN (DUF566)-RELATED 12 493 - -
Adu03g01351 493 PANTHER AUGMIN FAMILY MEMBER 12 493 - -
Adu03g01351 493 MobiDBLite consensus disorder prediction 58 89 - -
Adu03g01351 493 MobiDBLite consensus disorder prediction 1 89 - -
Adu03g01351 493 Coils Coil 341 361 - -
Adu03g01351 493 MobiDBLite consensus disorder prediction 7 42 - -
Adu03g01351 493 MobiDBLite consensus disorder prediction 43 57 - -
Adu03g01351 493 Pfam QWRF family 146 466 IPR007573 -
Adu03g01351 493 MobiDBLite consensus disorder prediction 162 186 - -
Adu03g01351 493 MobiDBLite consensus disorder prediction 105 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01351 Adu-Chr3 19882957 19887641 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01351 - - ahf:112732935 796.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01351 03 19882957 19887641 Adu03g01351 03 19882957 19887641 ECH
Adu08g01644 08 27199692 27202144 Adu03g01351 03 19882957 19887641 PCT