Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01335 ATGGCTTCCAGCACTCTATCCCCTTCTCAATTGTGTTCAGGGAAGAGAGGGATATTTAGCCCCTCAGAAGCAGTTGCTGTGAAGGGTGCGAGGAGGCAAACGGTTGGAAATGGGAAGGCGAAGGGGAAGGGAGTGAGAATCACATGCCAGGCTGGAAGCATTCCGGCAGATAGGGTGCCTGACATGGGGAAGAGGCAGCTGATGAATTTGTTGCTTCTTGGTGCCATCTCACTCCCCACTGCTGGCATGCTTGTTCCATATGCTACTTTCTTTGCCCCTCCAGGGTCTGGATCCTCTTCTGGTGGAACTGTTGCTAAGGATGCCGTTGGAAATGATGTTGTTGCTGAACTATGGCTCAAGGCTCATGGACCTGGTGACCGCACCCTAACACAAGGATTGAAGGGAGATCCTACCTACCTTGTGGTGGAGAAAGATAGAACCCTTGCAACATATGGGATTAACGCCGTCTGCACTCACCTTGGCTGTGTTGTGCCATGGAATGCAGCTGAGAACAAGTTCATTTGCCCTTGCCATGGATCGCAGTACAATGACCAAGGAAGAGTTGTCAGAGGACCTGCCCCCCTGTCTCTGGCACTAGCACATTGTGATGTAGATACTGGCAAGGTGGTGTTTGTTCCTTGGGTCGAAACAGATTTCAGAACCGAGCTAGGTCAAAAGGAAGTATCCGAGGCAGCCATGGTTACCGCAGACGATCCTCCAACAAGACTTCAGGGAAAGTATACAGCAATAGCAGTGTGTTGGTTTCTTGGAAATGGATGTCTTTTCGCATGGAACAGTATGCTGACAATAGTAGATTACTACAGTATCTTGTTTCCGAGATACCACCCTTCAAGAGTTCTTACTCTTGTATACCAGCCATTTGCAGTTGGAACGATTGCAACACTTGCCTACAACGAAGAAAGAATAAACACAAGATTTCGGAACCTATTTGGATACATTCTTTTCTTCTTAGCCACTCTTTTGGTGTTAGTTATAGATTTAGCAACATCTGGTAGAGGAGGAATTGGAACTTTCATTGGTATATGTGCAGTAAGTGGTGCATTTGGAATAGCAGATGCTCATGTCCAAGGTGGAATGGTGGGAGACCTTTCATTTATGCATCCTGAATTGCTTCAGTCTTTCCTTGCTGGTGGAGCAGCATCAGGTGCATTAACTTCTGCTTTGAGGTTAGTTACAAAAGCTGCATTTGAGAACTCCAAAGATGGTCTTCGCAAAGGAGCACTTCTGTTCTTTGGCATAACAACATTCTTTGAGCTTCTTTGTGTCATTCTCTATGCATTTGTGTTTCCCAAAGTACCAATTGTGAAGTATTACCGATCAAAAGCAGCATCAGAAGGAGCAAAAACTGTTTCAGCTGATCTTGCAGCCGCTGGCATCCAAACCTCATCTGACAATGAAGATGTAAAGAAACAAGAGCGCAAAGGGAAGAAGCAATTGTTAATGGAGAACATTGATTATGCAATTGATTTGTTCCTCATATATTCTCTAACACTGTCTATCTTCCCTGGATTCTTGTCAGAAGACACTGGAAAACATAGTTTGGGCGCTTGGTATGCTCTTGTTTTGATTGCCATGTACAATGTGTGTGACTTAATCGGAAGATACATTCCCCTAGTGAAATGCATTAAAATGGAGTCTCGAAAGTTGCTCACAACAACAATAGTTTGTCGTATCTTACTTATACCGGCATTTTATTTCACTGCAAAGTATGGTGACCAAGGTTGGATGATGTTGTTGACATCTTTCTTGGGATTATCAAATGGTTATCTCACTGTCTGTGTTCTTACCAGTGCACCCAAAGGTTACAAGGGACCAGAGCAAAATGCCTTGGGAAACATATTGGTGTCGTTTCTTCTTGCAGGCATCTTTGCTGGGGTAACACTTGATTGGTTGTGGTTAATAGGTAAAGGGTGGTGA 1938 0.4453 MASSTLSPSQLCSGKRGIFSPSEAVAVKGARRQTVGNGKAKGKGVRITCQAGSIPADRVPDMGKRQLMNLLLLGAISLPTAGMLVPYATFFAPPGSGSSSGGTVAKDAVGNDVVAELWLKAHGPGDRTLTQGLKGDPTYLVVEKDRTLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQYNDQGRVVRGPAPLSLALAHCDVDTGKVVFVPWVETDFRTELGQKEVSEAAMVTADDPPTRLQGKYTAIAVCWFLGNGCLFAWNSMLTIVDYYSILFPRYHPSRVLTLVYQPFAVGTIATLAYNEERINTRFRNLFGYILFFLATLLVLVIDLATSGRGGIGTFIGICAVSGAFGIADAHVQGGMVGDLSFMHPELLQSFLAGGAASGALTSALRLVTKAAFENSKDGLRKGALLFFGITTFFELLCVILYAFVFPKVPIVKYYRSKAASEGAKTVSADLAAAGIQTSSDNEDVKKQERKGKKQLLMENIDYAIDLFLIYSLTLSIFPGFLSEDTGKHSLGAWYALVLIAMYNVCDLIGRYIPLVKCIKMESRKLLTTTIVCRILLIPAFYFTAKYGDQGWMMLLTSFLGLSNGYLTVCVLTSAPKGYKGPEQNALGNILVSFLLAGIFAGVTLDWLWLIGKGW 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01335 645 PRINTS Rieske 2Fe-2S subunit signature 152 163 IPR005805 GO:0016020|GO:0051537
Adu03g01335 645 PRINTS Rieske 2Fe-2S subunit signature 173 185 IPR005805 GO:0016020|GO:0051537
Adu03g01335 645 PRINTS Rieske 2Fe-2S subunit signature 185 197 IPR005805 GO:0016020|GO:0051537
Adu03g01335 645 Pfam Nucleoside transporter 357 639 IPR002259 GO:0005337|GO:0016021|GO:1901642
Adu03g01335 645 PANTHER EQUILIBRATIVE NUCLEOTIDE TRANSPORTER 2 236 644 IPR030200 -
Adu03g01335 645 CDD Rieske_cytochrome_b6f 103 221 - -
Adu03g01335 645 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 236 644 IPR002259 GO:0005337|GO:0016021|GO:1901642
Adu03g01335 645 Gene3D Single helix bin 50 93 - -
Adu03g01335 645 Pfam Rieske [2Fe-2S] domain 140 196 IPR017941 GO:0051537
Adu03g01335 645 SUPERFAMILY ISP domain 57 220 IPR036922 GO:0051537
Adu03g01335 645 Gene3D - 94 228 IPR036922 GO:0051537
Adu03g01335 645 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 115 211 IPR017941 GO:0051537
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01335 Adu-Chr3 19575739 19582782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01335 237 643 Organic Solute Cotransporters AT4G05120 70.588 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01335 K15014 - gmx:100798899 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01335 03 19575739 19582782 Adu03g01335 03 19575739 19582782 ECH
Adu08g01618 08 26842826 26845787 Adu03g01335 03 19575739 19582782 PCT