LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu03g01318	ATGAAGAGCCCATGGCTCAGGCTTTCTCTTTTAACCACCATAACCATATGCTTCTTTTTTCACCCTCACAATTCCCATGCAGCTTTAACCTCAATCACTTCAAACCAATCTCTCTCCGGTGACCAAACTCTTGTCTCCAAAGATGAAAGCTTTGAACTGGGTTTCTTCAAACCAGGTAACACCTCTATCTACTACATAGGCATGTGGTACAAAAAAAGAGTCTCACAAAGAACCTATGTTTGGGTAGCAAATAGAGATAACCCAGTTTCTGATAAAAATTCTGCCAAATTAACAATATCTGAGGGGAATCTAGTACTCTTAGATGAATCCCAAAAACAAGTTTGGTCAACAAATTTAAGTCCTTCCAACTCAGATTCTAGAGCAGCTGTGCTCTTAGATTCTGGGAATCTTGTATTGAGTGATAAGCCTAATCCTTCAGAATCAGAATCTCTATGGCAAAGTTTTGATCATCCCACAGATACATGGCTTCCTGGTGGCAAAATTAAGCTTGACAAAAAAACTGGTAAACCTCAGTACCTAACTTCTTGGAAGAACACTCAAGATCCTGGAACAGGATTGTTCTCTTTGGAACTAGACCCTAAAGGAAGCAAAGCTTACTTGATCCTTTGGAACAAAACTAAAGAATATTGGACTAGTGGAGCTTGGAATGGTCAAATTTTCAGCGGGGTGCCTGAAATGAGGTTGAATTATATCTACAATTTCTCCTTCCATGATGATGAACCTGATGAGGCTTACTTCACTTACACGGTGTATAACTCTTCGATTCTTTCGCGGTTCGTGATGGATGTCTCCGGGCAGATCAAGCAGTTTTCATGGCTGGACAATACACAGAATTGGAACTTGTTTTGGTCTCAACCAAGGCAGCAGTGTGAGGTTTACACCTTCTGCGGCGCGTTTGGGAGCTGTACTGAGAATTCTATGCCTTACTGTAGTTGTTTGACAGGCTATGAGCCAAGTAATTCATCTAACTGGAACTTAGAGGATTACTCAAGTGGATGCAAGAGAAGAGCAAAGTTCCAATGCGAGACGGCGAATCCTAATGGTGGGGCAAAGGACAGGTTTACGGCGTTTCCAAACATGGCAGTGCCTAATAATTCTAAATCTTTGAGTGCAGGGAATGCAGAGGAATGTGCTTCATCCTGCTTGAACCAATGTTCTTGCACTGCTTATGCCTTTAACACTAAAGGTTGTTCGGTTTTCAAGGGTGATCTCTTGAATCTTCAGCAGCTTACTCAAGGAGATAGCAGTGGACAAACCTTGTTTTTAAGGCTTGCTGCTTCTGAATTTCATGATAGTAAGAGCAACAAGGGGACAATAATCGGCGCGGTCGCGGGTGGTGTTGGTGCCATTGTCGTACTCCTTGCAGCTCTTATCTGTTTCTTGGTGAGGAGAAGGAGGCGAATTCAAACCGGGACAACCATGGAGGGTTCTTTGGTGGCTTTTGCATACAGAGATTTGCAAAATGCGACAAAGAACTTCTCTgagaaacttggaggaggaggatttggtaggaggaaCTCCGAGCCGTCCGAAGACGGACAAGTCCGATTCTTCCCTACAACGGCGGCCTACACGGTGAACCAAGGTGGCAATGTTCTTGACCTATTGGACCCAAAGTTGGAGGGAAATGCTGAGATTGATGAGGTGGTTAGAGTGATCAAAGTTGCTTCTTGGTGCGTACAAGATGATGAGGCTCAAAGGCCTTCCATGGGTCAAGTTGTTCAAATTCTTGAAGGGCTTTTGGATGCTTCTTTTCCTCCAGTTCCAAGGTCACTACAGGCATTTGTTGAGAACCAAGAACACATTGTTTTCTTCACTGATTCAAGCTCTACACAGAGTTCACAAGCCAAAAGCAATGTCTCCACAACTTCTTCTCAAGCCAAAAGCAATGTGTCGCAAGATTAG	1926	0.4258	MKSPWLRLSLLTTITICFFFHPHNSHAALTSITSNQSLSGDQTLVSKDESFELGFFKPGNTSIYYIGMWYKKRVSQRTYVWVANRDNPVSDKNSAKLTISEGNLVLLDESQKQVWSTNLSPSNSDSRAAVLLDSGNLVLSDKPNPSESESLWQSFDHPTDTWLPGGKIKLDKKTGKPQYLTSWKNTQDPGTGLFSLELDPKGSKAYLILWNKTKEYWTSGAWNGQIFSGVPEMRLNYIYNFSFHDDEPDEAYFTYTVYNSSILSRFVMDVSGQIKQFSWLDNTQNWNLFWSQPRQQCEVYTFCGAFGSCTENSMPYCSCLTGYEPSNSSNWNLEDYSSGCKRRAKFQCETANPNGGAKDRFTAFPNMAVPNNSKSLSAGNAEECASSCLNQCSCTAYAFNTKGCSVFKGDLLNLQQLTQGDSSGQTLFLRLAASEFHDSKSNKGTIIGAVAGGVGAIVVLLAALICFLVRRRRRIQTGTTMEGSLVAFAYRDLQNATKNFSEKLGGGGFGRRNSEPSEDGQVRFFPTTAAYTVNQGGNVLDLLDPKLEGNAEIDEVVRVIKVASWCVQDDEAQRPSMGQVVQILEGLLDASFPPVPRSLQAFVENQEHIVFFTDSSSTQSSQAKSNVSTTSSQAKSNVSQD	641

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu03g01318	641	Gene3D	Transferase(Phosphotransferase) domain 1	509	592	-	-
	Adu03g01318	641	ProSiteProfiles	PAN/Apple domain profile.	348	432	IPR003609	-
	Adu03g01318	641	SMART	blect_4	35	158	IPR001480	-
	Adu03g01318	641	SUPERFAMILY	Hairpin loop containing domain-like	359	415	-	-
	Adu03g01318	641	CDD	TM_EGFR-like	443	476	-	-
	Adu03g01318	641	CDD	PAN_AP_plant	354	432	-	-
	Adu03g01318	641	SUPERFAMILY	alpha-D-mannose-specific plant lectins	79	189	IPR036426	-
	Adu03g01318	641	MobiDBLite	consensus disorder prediction	614	641	-	-
	Adu03g01318	641	CDD	B_lectin	35	158	IPR001480	-
	Adu03g01318	641	Gene3D	-	24	156	IPR036426	-
	Adu03g01318	641	PANTHER	S-LOCUS LECTIN KINASE FAMILY PROTEIN	11	510	-	-
	Adu03g01318	641	PANTHER	S-LOCUS LECTIN KINASE FAMILY PROTEIN	510	614	-	-
	Adu03g01318	641	Pfam	D-mannose binding lectin	78	184	IPR001480	-
	Adu03g01318	641	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT	11	510	-	-
	Adu03g01318	641	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT	510	614	-	-
	Adu03g01318	641	Pfam	S-locus glycoprotein domain	217	326	IPR000858	GO:0048544
	Adu03g01318	641	Pfam	PAN-like domain	357	413	IPR003609	-
	Adu03g01318	641	ProSiteProfiles	Bulb-type lectin domain profile.	29	152	IPR001480	-
	Adu03g01318	641	SMART	ntp_6	356	431	IPR003609	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu03g01318	Adu-Chr3	19105088	19107565	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu03g01318	540	639	Receptor kinase-like Gene Family	AT4G11480	32.000	4.47e-08	54.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu03g01318	-		-	adu:107477835	969.918