Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01316 ATGGATGAAGCTCTAATATCGGTGGACCGTTGGGTGAAAGGAAGCCAGGCGTACTTCCTGACCCACCTCCACGCCGATCACACCAAAGGCCTCTCTTCCACGTGGTCCCACGCTCCTCTCTACTGCTCCTCTTTCACCGCTGACCTCATTCCCTTAAAGTTCTCCGACTTCGACCTCTCTCTCCTCCACGTCTTCGAAATCGGCACCTGGCAAACCCTCAACCTCATCTCCCGTTCCTCCGGCGCTCCCACCGCCGTCGAATTCATCGCAATCGATGCCTGTCACTGTCCCGGTTCGGTTATGTTGCTGTTTCGTGGCGAGTTTGGGTGCATGCTGTACACGGGGGATTTTCGATGGGAGGTGGGTTGTGAGAGGGCTGCGAAGGCAAAGGAGATGCTTGCGGGTGCTATCAAGGATGATAAGGTGGATGTGGTTTACCTTGACAACACGTACTGTAATCCTATCTATGATTTTCCAAATCGCCAAGTTGCAGCTCAGCAGATTATTGATATCATTGCTTCTCATCCTGACCATGATGTTATTATTGGGATTAACACTCTGGGAAAAGAAGATCTTTTGGTTCAAATTTCAGAGGCGCTTAAGATTAAGATTTGGGTGTGGCCAGAGCGAATGTGGACTATGGATCTTCTTGGTTTCTATGATAACTTTACAATCAACACAAGTATTACTAGAGTGAGAGCTGTTCCTCAGTATAGCTTTAATGTTGAAACTTTAGAGGAACTGAACAGAATTAAGTGCCCAACCATAGGTATTATGCCATCAGGTCTTCCATGGGTAAAGAAATCCCCTCCAAAGACCAAGTCTATTTCACGTGCACATTTGACAGCTCGTTGTAAGAAAGCAGAATGGAGTGAAGACGACGATGAGTACGAGCCAATGGGGGATATAGGACCTCCCGAGAAGCTTCACAAGTACATATTTACTGTTCCATACTCTGATCATTCAAATTTTGCAGAGATAATGGATTTTGTGAAGCTTATCAGGCCAAAAAACCTGAAGGGCATTGTGTCTTCTTCATCGTGTTATATTGAACCTATGTACTACCTCCGTCTACTTTGTCAAGGCAACCGTCCTTCAGAAGTGTTGAATAGCAAGCTTAAAAGGAAAGCTAGAGCTACAGTAGCTGGGAGCAACAAAAAACCATCAGGTTCTTATAATGCTGAGTTGGTGAGAAAGAGAAGCATGACTTTGAAGGCCAGGCTTAAGCGAATTCGTTTGAGCAAGCATAGTATACTGAGAAAAGTGCGCAAGGGTGCGAAAATTCCGGATATAAGTGCTGATCTAAAGACTGACAGTGATGGAAATCAAGTGGAATAG 1338 0.4559 MDEALISVDRWVKGSQAYFLTHLHADHTKGLSSTWSHAPLYCSSFTADLIPLKFSDFDLSLLHVFEIGTWQTLNLISRSSGAPTAVEFIAIDACHCPGSVMLLFRGEFGCMLYTGDFRWEVGCERAAKAKEMLAGAIKDDKVDVVYLDNTYCNPIYDFPNRQVAAQQIIDIIASHPDHDVIIGINTLGKEDLLVQISEALKIKIWVWPERMWTMDLLGFYDNFTINTSITRVRAVPQYSFNVETLEELNRIKCPTIGIMPSGLPWVKKSPPKTKSISRAHLTARCKKAEWSEDDDEYEPMGDIGPPEKLHKYIFTVPYSDHSNFAEIMDFVKLIRPKNLKGIVSSSSCYIEPMYYLRLLCQGNRPSEVLNSKLKRKARATVAGSNKKPSGSYNAELVRKRSMTLKARLKRIRLSKHSILRKVRKGAKIPDISADLKTDSDGNQVE 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01316 445 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 6 422 - -
Adu03g01316 445 Pfam DNA repair metallo-beta-lactamase 224 339 IPR011084 -
Adu03g01316 445 Gene3D - 5 342 IPR036866 -
Adu03g01316 445 SUPERFAMILY Metallo-hydrolase/oxidoreductase 16 339 IPR036866 -
Adu03g01316 445 Gene3D - 157 321 - -
Adu03g01316 445 PANTHER PROTEIN ARTEMIS 6 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01316 Adu-Chr3 19094982 19097946 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01316 K15341 - gmx:100775842 493.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01316 03 19094982 19097946 Adu03g01316 03 19094982 19097946 ECH