Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01294 ATGGGCACTTCTAATCCTAACATGCTGCTAAATTATGTTCCAGTGTATGTCATGCTCCCACTAGGAGTTGTGAATGTGAATGATGTGTTTGAAGACCCAGAAGGCCTAAAGAAACAACTATTGCAGCTAAAGGAAGCAGGCGTTGATGGCGTGATGGTTGATGTGTGGTGGGGGATCATAGAACTGAACGGTCCAAAACAATATGATTGGGGCACATATAGGAGCTTGTTCAAGCTGGTTCAAGAATGTGGCCTGAAACTGCAGGCAATAATGTCATTCCATCAATGTGGAGGGAATGTAGGAGATATTGTCAATATCCCAATTCCAAAATGGGTGCTTGACATTGGAGATTCGGATCCTGATATCTTTTACACCAATAGATCAGGTAACAGGAACATAGAGTATCTCACTATTGGTGTAGATAACCTCCCTCTTTTCCATGGTAGAACAGCCATCCAGATATACAGTGATTACATGAAGAGTTTCAAGGAAAACATGTCAGATTTTATAGAATCTGGACTAATTATAGACATTGAAGTTGGGCTTGGACCAGCAGGAGAGCTTAGATTCCCTTCTTATCCACAAAGTCAAGGATGGGAATTTCCTGGTATTGGGGAGTTTCAGTGCTATGACAAATATTTGAAGGCAGAGTTTAAAGCTGCTGCAGCTAAAGCTGGCCATGCTGAATGGGAACTGCCAGATGATGCAGGGTCTTACAATGATGTACCAGAATCTACTGAGTTCTTCAAATCAAATGGAACATACCTCACTGAAAAAGGGAAGTTCTTCTTAACTTGGTATTCCAACAAATTGCTGATCCATGGTGATCAGATCCTAGAGGAAGCCACCAAAGCTTTCCAGGGCTGCAATGTCACGATAGCAATTAAAGTCTCTGGAATTCATTGGTGGTACAAATCTGAAAGTCATGCTGCTGAGCTCACTGCTGGATATTACAACCTTCAAGATAGAGATGGGTACCGTCCTATTGCAAGGATGCTGACTCGTCATCATCGATGA 1017 0.4228 MGTSNPNMLLNYVPVYVMLPLGVVNVNDVFEDPEGLKKQLLQLKEAGVDGVMVDVWWGIIELNGPKQYDWGTYRSLFKLVQECGLKLQAIMSFHQCGGNVGDIVNIPIPKWVLDIGDSDPDIFYTNRSGNRNIEYLTIGVDNLPLFHGRTAIQIYSDYMKSFKENMSDFIESGLIIDIEVGLGPAGELRFPSYPQSQGWEFPGIGEFQCYDKYLKAEFKAAAAKAGHAEWELPDDAGSYNDVPESTEFFKSNGTYLTEKGKFFLTWYSNKLLIHGDQILEEATKAFQGCNVTIAIKVSGIHWWYKSESHAAELTAGYYNLQDRDGYRPIARMLTRHHR 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01294 338 SUPERFAMILY (Trans)glycosidases 11 337 IPR017853 -
Adu03g01294 338 Gene3D Glycosidases 5 338 - -
Adu03g01294 338 PANTHER - 4 337 IPR001554 GO:0000272|GO:0016161
Adu03g01294 338 Pfam Glycosyl hydrolase family 14 16 336 IPR001554 GO:0000272|GO:0016161
Adu03g01294 338 ProSitePatterns Beta-amylase active site 1. 94 102 IPR018238 GO:0000272|GO:0016161
Adu03g01294 338 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 47 61 IPR001554 GO:0000272|GO:0016161
Adu03g01294 338 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 255 274 IPR001554 GO:0000272|GO:0016161
Adu03g01294 338 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 90 111 IPR001554 GO:0000272|GO:0016161
Adu03g01294 338 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 68 86 IPR001554 GO:0000272|GO:0016161
Adu03g01294 338 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 291 307 IPR001554 GO:0000272|GO:0016161
Adu03g01294 338 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 308 319 IPR001554 GO:0000272|GO:0016161
Adu03g01294 338 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 326 338 IPR001554 GO:0000272|GO:0016161
Adu03g01294 338 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 183 205 IPR001554 GO:0000272|GO:0016161
Adu03g01294 338 PRINTS Plant beta-amylase signature 329 338 IPR001371 GO:0000272|GO:0016161
Adu03g01294 338 PRINTS Plant beta-amylase signature 173 182 IPR001371 GO:0000272|GO:0016161
Adu03g01294 338 PANTHER BETA-AMYLASE 6 4 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01294 Adu-Chr3 18678266 18680681 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01294 8 337 Glycoside Hydrolase AT2G32290 70.997 1.54e-176 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01294 K01177 - gmx:547931 589.341