Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01290 ATGGAATCTTGTTACTGCAATCTTGAAGTTGAGGTAAATGGAGAAGAGACCTTCATGGTTGACAAGGCTATTATTGCTCAATACTCAAGCAAGTTAGCTAGATTATTTGGAAAATCTAGTGGTCCCAGTGGGAAACTCAAAGTAATATTCCATGATTTTCCAGGGGGTGCTGAGGGTTTTGAGCTTATGCTAAAATTTTGTTACAACAATGGAAGCATTGACATGAACTCTTCCAATTTGTTACAAGCACATTGTGCTGCTGGGTACATGGAAATGAAGGATTCTGTTCTTGGTGTTCCTAATTTGTTGGAACAAACAGAGAAGTCACTTGAAGAAATAAGCTATTGGAGATGGTCTGAACTTTTGGTTGCTTTGAAACAGTGCCAGAATCTATCAACTGTGTTGGATTACTATTCTAATTCAATGATGCTGGAGAAGTGTATGGACACCATTGTTGGGAGAATGTTTCTTGCTAGTGAAGCAAGCCCATGCCCTTCAACTTGCTCAACTGATAGTTCTTCCGGTGGGGTCCGGTTTTCGTGTGATTCGAAGAGTACTGAGAGTATCAAGACGAGTAGCTTCAGTTCGCGTCCGTGTTGGTGGTTTGAGGATCTTGTTTTCTTGAATCCGGTTCTGGTTGAAATGTTGGTGAGGTCAATGATCACAAGAAAATTGGAACATGGTTTGATTAGTAGGTTTCTAATGTATTATCAAAAAGCAAGATTTTCAAGTACTATTGATGTGAGTGAGAAGATTAAGATCTTGGAAATGGTCATAGATATGCATTATGATATGGAGTACTACCATAATAGTTCAATCCCTTTTAAGACCTTGTTTGGGATTCTAAGAATTAGTTTGAGTTTGAACATAAGCAAAAGTTGTAGGCACAAGTTGGAGGCCATGATTGGTTCCAATTTGGATCAAGCAACTTTGGACAATTTGCTTGTTCCATCACCATATGGAATAAGTTACTTGTATGATGTGAAACTTGTTCTCAAGTTTCTAAAGGCGTTCTTGCGACGCGGCGGCAGCGTTGTTGCTCCCACTAGGATGAAGAAAGTTGCAAGCTTGATAGATTTGTACATAGCAGAGATAGCACCTGATCCTTCTTTAAGGCCTTCTAAGTTCTTGGCTCTTGCCACTGCAATTCCAGATTCTGCAAGAGACTCTTATGATGAGCTCTACCATGCCATGGACATGTACCTTGAGGTTCATGGTCAATTGTCAGAAGAAGAAAAGGTGAAGATATGTTGTGGATTAAACTATGATAAGCTTTCACCACAAGCTTGCATACACCTTTCTCAGAACACAAAATTCCCATCAAAATCAGCAGTTCAGGCTCTCATATCACAACAATCAAAGCTCAAAAACTTGATCCAATCTACTCCAGCTACATCACCATTACTCAATGGCTCATCACCCCCTTTCTGCTTTACAAATGTTAATGCACAAAAGGGAAACAAAGACAAAAGCAATGACCAAGTTGTGTTGTATTCTTCTACTGGAGACTTTGATGCTTCATCTGATAATGAGAGACTCAAGGCACATTTGCAAGGAATGCAATGGAGGGTTATGGAATTAGAGAAAATCTGTAAGAAAATGCAAACTCAGATGGCAAAGATCACAAAATCAAAAGTACCACCCAATAGTTATGCAAGATCTTTGCCTAAGCTCTGTTCATGA 1683 0.3939 MESCYCNLEVEVNGEETFMVDKAIIAQYSSKLARLFGKSSGPSGKLKVIFHDFPGGAEGFELMLKFCYNNGSIDMNSSNLLQAHCAAGYMEMKDSVLGVPNLLEQTEKSLEEISYWRWSELLVALKQCQNLSTVLDYYSNSMMLEKCMDTIVGRMFLASEASPCPSTCSTDSSSGGVRFSCDSKSTESIKTSSFSSRPCWWFEDLVFLNPVLVEMLVRSMITRKLEHGLISRFLMYYQKARFSSTIDVSEKIKILEMVIDMHYDMEYYHNSSIPFKTLFGILRISLSLNISKSCRHKLEAMIGSNLDQATLDNLLVPSPYGISYLYDVKLVLKFLKAFLRRGGSVVAPTRMKKVASLIDLYIAEIAPDPSLRPSKFLALATAIPDSARDSYDELYHAMDMYLEVHGQLSEEEKVKICCGLNYDKLSPQACIHLSQNTKFPSKSAVQALISQQSKLKNLIQSTPATSPLLNGSSPPFCFTNVNAQKGNKDKSNDQVVLYSSTGDFDASSDNERLKAHLQGMQWRVMELEKICKKMQTQMAKITKSKVPPNSYARSLPKLCS 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01290 560 Pfam NPH3 family 200 430 IPR027356 -
Adu03g01290 560 SUPERFAMILY POZ domain 3 96 IPR011333 -
Adu03g01290 560 SMART BTB_4 6 107 IPR000210 GO:0005515
Adu03g01290 560 ProSiteProfiles BTB domain profile. 6 70 IPR000210 GO:0005515
Adu03g01290 560 Pfam BTB/POZ domain 4 96 IPR000210 GO:0005515
Adu03g01290 560 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 12 560 - -
Adu03g01290 560 ProSiteProfiles NPH3 domain profile. 199 454 IPR027356 -
Adu03g01290 560 PANTHER OS12G0117600 PROTEIN 12 560 IPR043454 -
Adu03g01290 560 Gene3D Potassium Channel Kv1.1; Chain A 1 144 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01290 Adu-Chr3 18602292 18606058 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01290 18 540 EF-hand Containing Proteins AT3G44820 28.147 5.23e-57 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01290 - - adu:107477823 1090.49