Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01175 ATGATCCATcccattccatctagtgagCTACGTTCGGTTTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTCTCCCATTGAATTATTTACCATGGCTAAGAGCTCATTCAAGATGGAACACCCACTTGAAAGGAGGCAGGCTGAGGCAGCTCGCATAAGAGAGAAGTATCCTGATAGAATTCCAGTAATTGTTGAAAGGGCAGAGAAGAGTGATGTTCCTGAAATTGATAAGAAAAAGTTAGTTTTTTTATTACCTTTGATGATAAGTGCAATTTTAATTTCTTTACAAATCAAGCTGAGTCCAGAAAAGGCTATCTTCATTTTTGTGAAGAACATTTTGCCACCAACTGCGGCTATTATGTCTGCGATTTATGAGGAAAATAAGGATGAAGATGGATTCTTGTACATGACTTACAGTGGGGAAAATACATTTGGTGTGATAATCTGA 453 0.3664 MIHPIPSSELRSVSSLSLSLSLSLFSPIELFTMAKSSFKMEHPLERRQAEAARIREKYPDRIPVIVERAEKSDVPEIDKKKLVFLLPLMISAILISLQIKLSPEKAIFIFVKNILPPTAAIMSAIYEENKDEDGFLYMTYSGENTFGVII 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01175 150 PANTHER AUTOPHAGY-RELATED PROTEIN 18 147 - -
Adu03g01175 150 Gene3D - 29 148 - -
Adu03g01175 150 Pfam Autophagy protein Atg8 ubiquitin like 46 147 IPR004241 -
Adu03g01175 150 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 18 147 IPR004241 -
Adu03g01175 150 SUPERFAMILY Ubiquitin-like 35 147 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01175 Adu-Chr3 13176343 13179548 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01175 K08341 - gmx:100301895 184.496
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01175 03 13176343 13179548 Adu03g01175 03 13176343 13179548 ECH