Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01114 ATGTATGCCATGCATGATCTGTTGTTCTTTGCTTTTACTTTGGGACAGGCTTATGCACGAGAGGTTGATGAGCATAAACGAACTCTGCTTTTGATTAATAAGGCAGATCTTCTACCTGCTTCTATCAGAGAGAAGTGGGCAGAATACTTTCGTGCTCATGATATTTTGTTCATTTTCTGGTCTGCTAAAGCTGCTTCTGCAGCTCTGGAATGCAAAAAGCTTGGTTCATCTCAGGAGGCTGTTAACACTGGGGGAACCAATAACCCAGATACAAAGATATATGGAAGGGATGAGCTCTTGGCACGTTTACAATCAGAGGCAGAAGAGATTGTTGAAATGAGGAGAAATTCAAGCTCCTCTGACACAGGGCCATCTAACATCAAAGCATCGGGTGAAAATGCTGCTGGTAATTCATCATCAAGTAACGTAATTGTGGGATTTGTTGGATATCCTAATGTGGGGAAAAGTTCAACCATCAATGCTCTTGTCGGTCAAAAAAGGGCTGGTGTCACCTCTACCCCGGGAAAAACAAAGCACTTCCAGACATTAATTATTTCTGACAAACTTACCCTTTGTGATTGCCCTGGATTAGTTTTTCCGTCATTCTCAAGCTCCAGATATGAGATGGTTGCTTGTGGAGTGCTGCCTATTGATAGGATGACTGAACACAGGGAGTCTGTCCAAGTTGTAGCCAATAGAGTCCCAAGACATGTCATAGAGGAGGTTTATAAAATCACTCTTCCAAAGCCTAAGCCGTATGAACCACAATCCCGGCCCCCTTTGGCATCCGAGCTTTTGAGAGCATATTGTGCATCTCGTGGCTATGTCTCCTCTAGTGGGCTGCCTGATGAAACTAGGGCTGCTCGTCAGATCCTGAAAGATTACATTGATGGGAAGCTGCCTCACTTCCAATTGCCCCCGGGTATGTTAAACGAAGAGCTGCCTGTGGAAGATCACATGGGACAACATGACTTGGCTAACTTGCATGAGTCAGATTCATCTGGTATTGAACAGTCTTCAGATGTTGAGAGCGAGGTTACACCAAATCTTGATCACATATTGGACGACCTCAATTCGTTTGACATGGCCAATGGACTTGCTTCAAAGAAAGTTACTGTCAAGAAAGCTAAGGCGTCGTCTCATAAGCACCATAAGAAGCCTCAGAGGAAGAAGGATCGTTCATGGAGGGCAGGGAATGATGATGGTGATGGCATGCCGGTTGCAGGATTCTTTCAGAAACCAGTAAATACTGGTCCTACGAAGGTCTGA 1269 0.4468 MYAMHDLLFFAFTLGQAYAREVDEHKRTLLLINKADLLPASIREKWAEYFRAHDILFIFWSAKAASAALECKKLGSSQEAVNTGGTNNPDTKIYGRDELLARLQSEAEEIVEMRRNSSSSDTGPSNIKASGENAAGNSSSSNVIVGFVGYPNVGKSSTINALVGQKRAGVTSTPGKTKHFQTLIISDKLTLCDCPGLVFPSFSSSRYEMVACGVLPIDRMTEHRESVQVVANRVPRHVIEEVYKITLPKPKPYEPQSRPPLASELLRAYCASRGYVSSSGLPDETRAARQILKDYIDGKLPHFQLPPGMLNEELPVEDHMGQHDLANLHESDSSGIEQSSDVESEVTPNLDHILDDLNSFDMANGLASKKVTVKKAKASSHKHHKKPQRKKDRSWRAGNDDGDGMPVAGFFQKPVNTGPTKV 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01114 422 PRINTS GTP1/OBG GTP-binding protein family signature 191 206 IPR006073 GO:0005525
Adu03g01114 422 PRINTS GTP1/OBG GTP-binding protein family signature 145 165 IPR006073 GO:0005525
Adu03g01114 422 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 275 IPR027417 -
Adu03g01114 422 CDD HSR1_MMR1 7 200 - -
Adu03g01114 422 MobiDBLite consensus disorder prediction 112 138 - -
Adu03g01114 422 Coils Coil 96 116 - -
Adu03g01114 422 Gene3D - 5 201 IPR027417 -
Adu03g01114 422 Pfam 50S ribosome-binding GTPase 145 201 IPR006073 GO:0005525
Adu03g01114 422 MobiDBLite consensus disorder prediction 116 138 - -
Adu03g01114 422 Gene3D - 204 307 IPR023179 -
Adu03g01114 422 PANTHER - 8 417 - -
Adu03g01114 422 MobiDBLite consensus disorder prediction 374 392 - -
Adu03g01114 422 PANTHER LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED 8 417 IPR043358 GO:0003924
Adu03g01114 422 MobiDBLite consensus disorder prediction 373 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01114 Adu-Chr3 12296856 12298598 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01114 K14539 - gmx:100817523 646.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01114 03 12296856 12298598 Adu03g01114 03 12296856 12298598 ECH