Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01075 ATGAGTGAGAGTAACAGCAACAGCAACGGGGTGAGCAATATCAACATCATCAACAACAACAACAACAACAACCACCACCACCACAGCAGCAGCAGCAGTAAGGAAGAGAAAGGCAGAGATCTGGGGCTATACTTTCTAGAAGTGTGCCGGCGGAGGGGGACGGGGGCGGAGGAGGGGGAAGAGAAGGCGGAGGAGGCCCCCAGCGAGCTCAACACCATCAACAGCTCCGGCGGATTCGTGGTGGTGTCGACGGACAAGCTGTCAGTTAAGTACACGAATGTGAACCTTCACGGCCACGACGTCGGCGTGATTCAGGCGAACAAGGCTGCTCCCACGAAGCTGCTCCTCTACTACTTCGAGATTTATGTGAAGGACGCCGGCGCCAAGGGCCAGATTGCCATCGGCTTCACCTCCGAGTCTTTCAAGATGCGTAGGCAGCCCGGGTGGGAGGCCAATAGCTGTGGATATCACGGGGATGATGGGCTTCTTTATCGTGGACATGGCAAAGGGGAACCCTTCGGCCCTACCTATACATCTGGCGATATTGTTGGCGCTGGAATCAACTATGCTGCCCAGGAATTCTTCTTCACTAAAAATGGGCAAGTTGTTGGCACAGTTTACAAGGACATGAAGGGTCCACGCTTTCCTACCATTGCTGTTCATAGCCAAAATGAAGAGGTGCATGTCAACTTTGGGCAGAAACCATTTACCTTTGACCTAAAGGAATTTGAAGTGCAAGAAAGAATGAAGCAACAACTGAAAATAGAGGAATTGCCTCTGACATCAAATGTTAGTTACGGAATTGTCCGTTCTTACCTGCTACACTATGGCTACGAAGATACCTTGAATTCATTTGATGTGGCTAGTAGAAGTACTGTTCCTCCTATATATATAGCTCAGGAGAATGGGGTTGATGAGCAGGAAATAATGTATGCATTGAATCACCGAAAGACTCTCCGGCAGCTAATCAGGGATGGGGAGATTGATACTGCATTTGGTAAATTGCGAGAATGGTATCCCCAGATTGTTGAGGACAATACATCAGCTATGTGCTTTCTGCTTCATTGTCAGAAGTTTATTGAATTAGTTCGGATTGGAGCACTGGAGGAGGCTGTCAAATATGGAAGAATAGAGTTGTCAAGCTTTTTTGGGTTGCCTGTCTTTGAGGATCTAGTTCAGGATTGTGTTGCTTTGTTGGCATACGAACAACCACTGGAATCCCCTGTAGGTTATCTTCTAAAAGATTCACAACGTGAAGTTGTAGCTGACACAGTCAATGCGTTGATCTTGTCGACAAATCCCAACATGAAAGAGTCCAAAAATTGCTTGCACTCATATCTTGAGAGGTTACTTAGACAGCTAACTGCTTGTTGCTTGGAGAATAGATCTTTGAGTGGGGAGCAGGGAGAAGCTTTCCAACTTCATAGAGTGCTTAGCAGTGGTAAAAGAGGCTAG 1455 0.4729 MSESNSNSNGVSNINIINNNNNNNHHHHSSSSSKEEKGRDLGLYFLEVCRRRGTGAEEGEEKAEEAPSELNTINSSGGFVVVSTDKLSVKYTNVNLHGHDVGVIQANKAAPTKLLLYYFEIYVKDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGHGKGEPFGPTYTSGDIVGAGINYAAQEFFFTKNGQVVGTVYKDMKGPRFPTIAVHSQNEEVHVNFGQKPFTFDLKEFEVQERMKQQLKIEELPLTSNVSYGIVRSYLLHYGYEDTLNSFDVASRSTVPPIYIAQENGVDEQEIMYALNHRKTLRQLIRDGEIDTAFGKLREWYPQIVEDNTSAMCFLLHCQKFIELVRIGALEEAVKYGRIELSSFFGLPVFEDLVQDCVALLAYEQPLESPVGYLLKDSQREVVADTVNALILSTNPNMKESKNCLHSYLERLLRQLTACCLENRSLSGEQGEAFQLHRVLSSGKRG 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01075 484 SMART SPRY_3 114 235 IPR003877 GO:0005515
Adu03g01075 484 SMART ctlh 312 370 IPR006595 -
Adu03g01075 484 PANTHER RAN-BINDING PROTEIN M HOMOLOG 57 482 - -
Adu03g01075 484 Gene3D - 47 252 IPR043136 -
Adu03g01075 484 MobiDBLite consensus disorder prediction 1 38 - -
Adu03g01075 484 Pfam SPRY domain 117 233 IPR003877 GO:0005515
Adu03g01075 484 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 312 370 IPR006595 -
Adu03g01075 484 SUPERFAMILY Concanavalin A-like lectins/glucanases 74 238 IPR013320 -
Adu03g01075 484 SMART toby_final6 366 467 IPR013144 -
Adu03g01075 484 CDD SPRY_RanBP_like 102 232 IPR044736 -
Adu03g01075 484 MobiDBLite consensus disorder prediction 1 27 - -
Adu03g01075 484 ProSiteProfiles B30.2/SPRY domain profile. 48 236 IPR001870 -
Adu03g01075 484 PANTHER RAN BINDING PROTEIN 9-RELATED 57 482 - -
Adu03g01075 484 Pfam CTLH/CRA C-terminal to LisH motif domain 314 456 IPR024964 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01075 Adu-Chr3 11413841 11420356 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01075 K23334 - gmx:100805319 786.178