Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01025 ATGGATTTGATTATGATAGTGGTTGGTTCATTAATGTTATTAACGGTGACAGAGAGAAGCAGGGGTCACGATTATGGAGATGCATTATCGAAGAGTATATTGTTCTTTGAAGCTCAGAGGTCAGGGAAGTTGCCACCAACACAGAGGGTTACTTGGAGGAAGGATTCCGCCGTCCACGACGGCGATCAATTTCAGGAAGGCGTGTCCCACTTGTACCGCAAAGTTGACTTGGTTGGCGGTTACTACGACGCGGGCGACAACGTGAAGTTCAACTTTCCAATGGCATTCTCAACAAGCATGCTAGCATGGAGTGTGATACAGTTCGGGAGTTCCATGGGAGCAGAACGAAAGCACGCTTTAGAGGCTATTCGTTGGGGCGCGGAGTACTTGATGAAAGCAACTAGCGTCCCTGGCTATGTGGTTGTACAGGTTGGTGATCCGTACAGTGACCACAATTGTTGGCAGAGGCCTGAAGACATGGACACTTCTAGAACCTTCTATGCGGTTAGCAAGGAGTACCCTGGTTCTGAGGTTTCCGCGGAGATTGCAGCTGCGCTTGCAGCCTCTTCCATTGTCTTTAAACGATATCAACTTGCTTATTCTGCTAGGCTTCTCCGAAGAGCTAGAATGGTGTTTGAGTTTGCAGATAAGTACAGAGGATCTTACAATGACGGCCTTGGACACTGGGTATGCCCATTCTATTGTGATTATAGTGGCTACCAGGATGAATTGGTGTGGGGAGCAGCATGGTTGTTTAAGGCTACTAAAAACTCTTATTATCGGAAATACATTGACGAAAACATTCACAACCTCAAAACCTTCGCTGAATTTGGATGGGACTCCAAGGATGCTGGCATCAATGTGCTTCTTTCTACGCTTATGATTAATAATAGTAGTAACTCTAATGCGGACAAGTTTATCTGTTCTGTGCTACCTGAATCACCTTCCCTATCAGTTTCATACTCTCCAGTAGGAGAGCTTATGTTCAAACAAGGAGGGAGTAACTTGCAACATGCAACGGCATTTTCATTTCTTTTCCTGGTTTATGCTGACTATTTGAACAAAGTTAATAGACACGTTGACTGTGGGGGTAAAGCTTCTGCAATATCCCCAACGCGACTTATACAATTTGCCAGAAGTCAGGTGGATTACATATTAGGAAGCAACCCATTGAAGATGTCATACATGGTAGGGTACGGAGAAAAGTATCCAAAAAGAATACATCACCGTGCATCTTCATTACCTTCCATAGATATGCAGCGTGGCCACATCGATTGCAAAGGAGGATCCTCTTATTTTCAAAGCCAAAACCCTAATCCCAATGTCCTTCTTGGAGCTCTAGTTGGGGGACCTGATATCAATGATCAATATGCTGATTCTCGATCCGATTTTGTGCACTCAGAACCTACAACCTATATAAATGCACCTTTTGTTGGTGCTTTGGCATATTTCAAATCACATTCATCCTCAAAACCAAATTAA 1482 0.4406 MDLIMIVVGSLMLLTVTERSRGHDYGDALSKSILFFEAQRSGKLPPTQRVTWRKDSAVHDGDQFQEGVSHLYRKVDLVGGYYDAGDNVKFNFPMAFSTSMLAWSVIQFGSSMGAERKHALEAIRWGAEYLMKATSVPGYVVVQVGDPYSDHNCWQRPEDMDTSRTFYAVSKEYPGSEVSAEIAAALAASSIVFKRYQLAYSARLLRRARMVFEFADKYRGSYNDGLGHWVCPFYCDYSGYQDELVWGAAWLFKATKNSYYRKYIDENIHNLKTFAEFGWDSKDAGINVLLSTLMINNSSNSNADKFICSVLPESPSLSVSYSPVGELMFKQGGSNLQHATAFSFLFLVYADYLNKVNRHVDCGGKASAISPTRLIQFARSQVDYILGSNPLKMSYMVGYGEKYPKRIHHRASSLPSIDMQRGHIDCKGGSSYFQSQNPNPNVLLGALVGGPDINDQYADSRSDFVHSEPTTYINAPFVGALAYFKSHSSSKPN 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01025 493 Gene3D - 20 493 IPR012341 GO:0005975
Adu03g01025 493 PANTHER ENDO-1,4-BETA-GLUCANASE 10 488 - -
Adu03g01025 493 SUPERFAMILY Six-hairpin glycosidases 23 490 IPR008928 GO:0005975
Adu03g01025 493 PANTHER ENDOGLUCANASE 10 488 - -
Adu03g01025 493 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 384 410 IPR018221 -
Adu03g01025 493 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 457 475 IPR033126 -
Adu03g01025 493 Pfam Glycosyl hydrolase family 9 25 481 IPR001701 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01025 Adu-Chr3 10656146 10658713 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01025 6 489 Glycoside Hydrolase AT1G70710 56.389 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01025 K01179 - gmx:100775752 712.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01025 03 10656146 10658713 Adu03g01025 03 10656146 10658713 ECH