Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01021 ATGGAGGGTATCAAAGATGATGTAGGACATGTTCCTTTGCTAGAAGCTGAAGAAGAAGAAGAAGAAGAAGAAGGAAGGAGACCCTTAAGGTTAAGGGGTAGTTACCTTGGCATATTTGGCTCTACCGTTTTCCTAGTTTCAATGGCTGCACTCATCATATACCAAGGCCATGATTATTATGATGAAGCCAAAATAGAAAACAAGGGTAACAACAACAATAATTACAACAAAGTCCCTAGAGGAGTAGCTGAGGGCGTTTCAGCAAAGTCAAACTCTTTTCTTTCGGAGACTACTCCTTCTTATAATTGGACCAATGCTATGTTATCTTGGCAAAGAACAGCTTTTCATTTTCAACCTGAAAGGAATTGGATGAACGATCCAAACGGTCCATTGTTTCACAAGGGTTGGTACCATCTATTCTACCAATACAATCCATTTTCAGCGGTGTGGGGTAACATCACATGGGGCCACGCAGTATCAAGGGACCTCATTCACTGGCTCTACCTTCCAGAAGCCATTGTCAGAGACATGTGGTTCGACATCAACGGTGCATGGTCAGGCTCAGCAACGCTCTTGCCAGGTGGCGAAATCGTGATGCTCTACACCGGCTACACCCACCAACAAGTGCAGGTTCAAAATCTCGCATACCCCGCCGACGCATCTGATCCCCTCCTCCTCAATTGGGTCAAATACGCCAAAAACCCCGTCATGGTTCCCCCACCCGGCATCGGCCCAAACGATTTTCGTGACCCAACAACGGCCTGGTTCGGCCCAGATAACAAGTGGACGCTCACGCTTGGCTCAATGCTCAATGATTCTGGCCTTTCCTTGGTTTATAAGACAACTGATTTTATCAACTATGAGCTTAATGACCACTTCCTGCATATCGTTCCGGGTACGGGAATGTGGGAGTGTGTTGACTTTTACCCGGTTTCAATAAACGGGTCGGTTGGGTTGGACACGTCAGCAAATGGTCCAGGTGTCAAGCACGTGTTAAAGGCGAGTTTGGATGATACAAAGCTGGACTATTATGCAATTGGGACATATTTTATTGAGAATGACACGTGGATACCCGATGACCCGGATTTGGATGTGGGTATCGGGTTGAGATTGGATTATGGAAAATACTATGCTTCAAAGTCATTTTATGACCAAAATAAACAAAGAAGGGTCCTTTGGGGTTGGATTAATGAATCGGATAGTGAGGTTGCTGATATCACAAAGGGTTGGGCATCTCTTCAGACTATTCCGAGAACAGTATTGTATGACAAGAAGACTGGAACTAATTTGCTTCAATGGCCAGTGGAAGAAATAGAGAGCTTGAGACTTAGCAGTCATGAATTTAAGGAATTATTGGTTAAACCTGGCACAGTAGTGCCATTACACATTGGCCCTGCAACACAGTTGGACATAATTGCTGAATTTGAAATAGAATTGTTGGGATCAGAAGGGATTGTGAATAATGTTGAAGGGTGTGGAGTTGGTGCTGTTGAGAGAAGTGCTTTTGGACCATTTGGCATTTTGGCTATTGCAAATGACCAACTTTCTGAACTAACACCAATTTACTTCCGTCTTTCAAATCATGGAAATGGAACCTCAACTATTACTACTTCTACTTCCTTCTGTGTTGATGAAACTAGGTCATCAAAGGCACCTGATGTATCAAAGCAAGTTTTTGGAAGCAAAGTGCCTGTTCTAAATGATGAAAAACTATCACTGAGGGTATTGGTTGATCATTCAATCATCGAGAGTTTTGCACAAGGAGGGAGAACTGTGATCAGTTCTAGAGTTTATCCAACAGAAGCAATCTATGGAGCTGCAAGATTGTTCCTGTTCAACAATGCAACAGACATTAACATCAAGGCCTCCCTTAAGATTTGGCAATTGAACTCTGCTTTTATACGCCCATTTCCCTTTCACGACACTCAATGA 1932 0.4337 MEGIKDDVGHVPLLEAEEEEEEEEGRRPLRLRGSYLGIFGSTVFLVSMAALIIYQGHDYYDEAKIENKGNNNNNYNKVPRGVAEGVSAKSNSFLSETTPSYNWTNAMLSWQRTAFHFQPERNWMNDPNGPLFHKGWYHLFYQYNPFSAVWGNITWGHAVSRDLIHWLYLPEAIVRDMWFDINGAWSGSATLLPGGEIVMLYTGYTHQQVQVQNLAYPADASDPLLLNWVKYAKNPVMVPPPGIGPNDFRDPTTAWFGPDNKWTLTLGSMLNDSGLSLVYKTTDFINYELNDHFLHIVPGTGMWECVDFYPVSINGSVGLDTSANGPGVKHVLKASLDDTKLDYYAIGTYFIENDTWIPDDPDLDVGIGLRLDYGKYYASKSFYDQNKQRRVLWGWINESDSEVADITKGWASLQTIPRTVLYDKKTGTNLLQWPVEEIESLRLSSHEFKELLVKPGTVVPLHIGPATQLDIIAEFEIELLGSEGIVNNVEGCGVGAVERSAFGPFGILAIANDQLSELTPIYFRLSNHGNGTSTITTSTSFCVDETRSSKAPDVSKQVFGSKVPVLNDEKLSLRVLVDHSIIESFAQGGRTVISSRVYPTEAIYGAARLFLFNNATDINIKASLKIWQLNSAFIRPFPFHDTQ 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01021 643 SMART glyco_32 116 589 IPR001362 GO:0004553|GO:0005975
Adu03g01021 643 Pfam Glycosyl hydrolases family 32 N-terminal domain 116 434 IPR013148 -
Adu03g01021 643 Gene3D - 446 629 - -
Adu03g01021 643 Pfam Glycosyl hydrolases family 32 C terminal 437 628 IPR013189 -
Adu03g01021 643 PANTHER ACID BETA-FRUCTOFURANOSIDASE 4, VACUOLAR 62 637 - -
Adu03g01021 643 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 62 637 - -
Adu03g01021 643 Pfam Beta-fructofuranosidase, N-terminal domain 11 108 IPR021792 GO:0004564
Adu03g01021 643 SUPERFAMILY Concanavalin A-like lectins/glucanases 434 633 IPR013320 -
Adu03g01021 643 Gene3D Glycosyl hydrolase domain; family 43 120 445 IPR023296 -
Adu03g01021 643 ProSitePatterns Glycosyl hydrolases family 32 active site. 116 129 IPR018053 GO:0004553|GO:0005975
Adu03g01021 643 MobiDBLite consensus disorder prediction 1 27 - -
Adu03g01021 643 CDD GH32_Fruct1-like 122 422 - -
Adu03g01021 643 SUPERFAMILY Arabinanase/levansucrase/invertase 109 435 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01021 Adu-Chr3 10564371 10571992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g01021 10 637 Glycoside Hydrolase AT1G12240 57.585 0.0 742
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01021 K01193 - gmx:100814788 951.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g01021 03 10564371 10571992 Adu03g01021 03 10564371 10571992 ECH