Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g01003 ATGTCGTTTCCACCTTCCAACAACAATACCCAGAACCAGAATCAGCATAATGCGATTATAAAGAACCCTAACCCTAACAATTTCCCAATTTCTTCTCCCACAAAGAAGAGAGCTTCAAGGTGGTCCGATATCTGGCTCAAGACCAACACCAACGCCAAGAATAATAATCCCCTCAACTCCATGGTCGTTGCTATGCAGCTTCACTCTCTATCTTCTTCCCCCAAACACCCGAAATCGATTCCCAATTTCTCAATCATGGACCGAACCCTACTCTTATCCGACGAGCTTCTTTTGAAGATCCTCGCCAAGCTTCCAGATTCTCAGAGGAACTCAAATTCCCTCGTTTGCAAGCGGTGGCTCAACCTCCAGGGTCGACTCGTTCGTTCCCTCAAGGTATTGGACTGGAACTTCCTCTTATCTGGTAGGTTGATTCACAGGTTCCCGAACCTAAATCACGTTGATTTGGTCTCTGGGTCTTTGATTTCTCCGAGAAATTCCGGAATTTGTTTGAGCCATCGTTATCTTTCCATGCATGTTGATTCTGCGTCTTCGCCAAGTTGGTGTTTTGGTGAGGAGAATTTGCTCCCTGTTGAGGTCATTGACAATGGCCTAATTGCTCTTGCCGGTGGCTGCCCCAATTTGCGCCGGCTTTCGGTGATCGGAGCCAGCGAGATGGGCCTGCTGAGTGTGGCTGAGGAGTGTTCCACATTGCAGGAGCTTGAGCTGCAGAGGTGCAGTGACAATGTACTTCGAGGGATCGCGGCTTGCGCGAATTTGCAGATCTTGAAACTTGTGGGGAATGTTGATGGTTTGTACACTTCAGTTGTGTCTGATATTGGGTTAACCATTTTGGCTCAGGGGTGTAAGAGGCTGGTGAAGCTTGAGCTTAGTGGGTGTGAAGGTAGCTTTGATGGGATCAAAGCCATTGGCAAGTGTTGCCAAATGTTGGAGGAGTTGACTTTTTGTGATCACAGGATGGATGATGGGTGGTTGGCAGCACTCTCATTTTGTGAGAATTTGAAGACATTGAGGTTCCAGTCTTGCAAACGGATCGATCATAATCCTGGTCTAGAGGAGTACTTGGGTTCTTGCGAGGCACTCGAACGGCTTCATTTGCACAAATGCCAGCTGCGCGACAAGAAGAGTGTTGCGGCCATGTTTTCCGTGTGCAGGGCTGCAAAGGAGATCATTATCCAGGATTGTTGGGGATTGGACAATACCATGTTTAGCTTCGCAAATGTTTGCAGGCGGGTAAAATTGTTGTACTTAGAAGGATGCTCAATGCTAACAAATGAAGGTTTGGAATCTGTAATCCATTCTTGGAAGGAGCTTCAGAGCCTTAAAGTAGTGTCATGTAAGAACATAAAGGACAGTGAAATCTCTCCTGAACTAGCAACCTTATTCACCACTCTCATAGATTTGAAATGGAGACCAGACACCAAATCACTTCTTCCATCAAGTCTTGCCGGAATAGGCATGGGTAAGAAAGGTGGTAAATTTTTCAGGAGGGTGTGA 1515 0.466 MSFPPSNNNTQNQNQHNAIIKNPNPNNFPISSPTKKRASRWSDIWLKTNTNAKNNNPLNSMVVAMQLHSLSSSPKHPKSIPNFSIMDRTLLLSDELLLKILAKLPDSQRNSNSLVCKRWLNLQGRLVRSLKVLDWNFLLSGRLIHRFPNLNHVDLVSGSLISPRNSGICLSHRYLSMHVDSASSPSWCFGEENLLPVEVIDNGLIALAGGCPNLRRLSVIGASEMGLLSVAEECSTLQELELQRCSDNVLRGIAACANLQILKLVGNVDGLYTSVVSDIGLTILAQGCKRLVKLELSGCEGSFDGIKAIGKCCQMLEELTFCDHRMDDGWLAALSFCENLKTLRFQSCKRIDHNPGLEEYLGSCEALERLHLHKCQLRDKKSVAAMFSVCRAAKEIIIQDCWGLDNTMFSFANVCRRVKLLYLEGCSMLTNEGLESVIHSWKELQSLKVVSCKNIKDSEISPELATLFTTLIDLKWRPDTKSLLPSSLAGIGMGKKGGKFFRRV 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g01003 504 MobiDBLite consensus disorder prediction 1 35 - -
Adu03g01003 504 Gene3D Ribonuclease Inhibitor 270 355 IPR032675 -
Adu03g01003 504 Gene3D Ribonuclease Inhibitor 356 469 IPR032675 -
Adu03g01003 504 SUPERFAMILY RNI-like 133 268 - -
Adu03g01003 504 SMART LRR_CC_2 211 236 IPR006553 -
Adu03g01003 504 SMART LRR_CC_2 364 389 IPR006553 -
Adu03g01003 504 SMART LRR_CC_2 288 312 IPR006553 -
Adu03g01003 504 SMART LRR_CC_2 415 440 IPR006553 -
Adu03g01003 504 SMART LRR_CC_2 256 287 IPR006553 -
Adu03g01003 504 Gene3D - 88 125 - -
Adu03g01003 504 SUPERFAMILY RNI-like 276 459 - -
Adu03g01003 504 SUPERFAMILY F-box domain 84 139 IPR036047 GO:0005515
Adu03g01003 504 PANTHER UNCHARACTERIZED 69 485 - -
Adu03g01003 504 PANTHER F-BOX PLANT-LIKE PROTEIN 69 485 - -
Adu03g01003 504 Gene3D Ribonuclease Inhibitor 188 269 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g01003 Adu-Chr3 10273423 10275989 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g01003 K10268 - gmx:100812193 712.605