Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00978 ATGGGATTCGATAATGAGTGCATTGTCAATATTCAATCACTTGCGGGAGAGTACTTCTGTCCAGTTTGTCGCCTCCTTGTGTACCCAAGCGAGGCTATGCAGTCACAATGCACTCACTTATACTGCAAACCATGCTTGACATATGTAGTGAGCACAACGAGAGCTTGCCCATACGATGGTTACTTGGTCACTGAGGCGGATTCTAAGCCTCTTACAGAGTCAAATAAGGCACTTGCTGAAACTATTGGAAAAATACCTGTTCATTGCCTATATCACAGGAGTGGATGCACATGGCAAGGAACATTGTCCGAGTGTACATCTCATTGTTCTGGATGTGTTTTTGGCAATTCTCCTGTTGTTTGCAATAGGTGTGGAATCCAAATAGTGCATCGACAAGTACAAGAGCATGCACAAAGTTGTCCTGGTGTGCAAAGTCAGGCACAGCAGGTTGCCGTTACCCAGGAACCTTCAGCCACCAGCACAGTTGCCTCTACTGATCAGAACCAGACTGCTGCTCCAGTTGGAGCTGTGGCTTCACAAGCTTTGAATTCTCAAACCGCTGTTACAACAACTACATCTGGGCAGGATTCGAGTCAGCTACCTAACCCAGCATCTCAATCTCAACCAACACAGAATGTTCAGACTGCTGCACCAACCGCAGAGCAATGGTATCAGCAGCAACAATATCAACAATACTACCTGCAATACCCTGGTCAAGATCCTTATCAACAGCAGTATCAACATTACTACCCTTATCAACAACCAGTAGGTCCACAGTACCAGCAGCCCTACAGCCAGCCCCAACCTCAGTCCCAGCCCCAGCCCCAGTCCCAGTCCCAGTCCCAGTCCCAGTCCCAGCCCCAGCCTCAGCCACAAGCCCAACACCAAGCGCAGCCTCAACTTCAACCGCAGGGAGTTTCTAATCCGCTTCCACAAGTTCCGGCTCTTGTGGCTCCGCAACCACAGAATCAGATGCAAGTTAACCAACAACAGCAGCAGCTTCAACCTGCTGTAACGCCACATGGTCAGATTCTGCCACAGAGTAATCCACCGGGTCTCACCCAAGCACTCTCTCAGCCTCAGTCTTCATATCCTTACCCCCTAGTTCCTCATGCTGTCCAGCCTCACCCTCAACCTCAGCAACATATGCAAATTCCTCCTTATCAGCAGCCTCACTCTCAAGCTCAGCATTCACAGCCTCAAATTCAACAGCCAGCTCAGAAGTATCCTGTTTCTCAACCTCAAGTTCATTCACAAGCACACCCTAATGCTCCAGTTCAACATCTTTCTCAGTCCCAAATGCGTCCTCACCAGTCCCTAACTCCTAGTGTCCAACCTCAAGGACAAAATGCATCGTCAAATGCAGTAACAGGCTTTCAATCTTATCCACAACCACAACCTCAACTTCACCAGAGTACTCAGCCAGGAGCTCCTCAACATGGTATGCAGATGCATGCTCAAAGTGGGCCTCTGCCTCATGCTCAGCATCCAGTCCTGATGCAGAATCAGTTTCCTCAGCAAATTCCAGTGATGCACCCACATCAAACTCCGGTGATGTTTCCTAATCAGCAACAGCCAGCTTTATTGCCTTCACCTGTTCAAGGCCAAGGTACCCCTCCTATCCAACAGCAGCCGGTTTTTAATCCCAATCAACAACCTGGTCCAATTAACCACCGTCCTACCCTGCAACCAGTTCAACAAAGTTTGGCTCAGCAACCTTTTGCACACATGCCCATGTCTTCTCATTTACGACCTCAAGGTCCAGGACATTCATTTCCCAGGCATTCTTATCCACCTGCACAAGGTAATCCTGCACCGTTAAATAGCACTCAGCTCAGTCAATCCCAAAATGCTGTTGGAAAACCTTCAATCCCCAATCATCCAATACAAATACAGGCATTTGCACACACTGCTAATAACATTCCAGTTAGACCAGGGCAAACTGGTTCCAGCCACCTGCATGAAAACCATAATTTGTTGGTTGGGACCAATAATCAAGTGCAGCTATCTTCTGATTTGCAGTCTGGGGCTCCAGCACCTCATGAAAGGCAAGGCAATGCCACTGAACAGCACACTGACTCTGCCACTGGGAAACTTGCTAAAAATTCTAAAGATTTTTATACAGCATCGTTATCAGAAAATGAGTTGAAATCTGAAAAGGTCAAAATGGATATAAAGCCTATTGATGCTGGGAACAAGCAAAATGGTGGAGATCAAAATGCCGTGAAAACCTCAGGCCCAAATGTCAATTCATTAGAAAATGGTGATTCAGTGGGTCAGAGTGTTGGTAAGGAAGAGGTTGCTGAAAATAACGGTAATGAGCATTCTGCTCCCAGGAGCAATGAGAATCAAGATGGTCCTCTGCTGAAGATGGAAACCAAGAAAGAGTCTGAAACTGATGAACTGAATAATGATGATGCACACACTTCAAGACCTGCTGCTGATCATGGTAAGCAACATCAACCAATGACTGAATATGCTGCTGTCCAGCAGAGGTCTTCTGCAATGAATCATGTACCTACCCATGATCCTCATTTGGGACAGGCAACCATGTTAAAGCAGCCACAAGGTATTGGCACCCAATTTGGCACACCAGGGCAAAACTTTCAACCTCAGTCTCTTGGACCTGCAGCGCCATATAATCAAGGTCAGGAACCTCCTTTTCATGCTGGTGCATCTAATTCATCTCGTATTGGAGGGCCACGATTTAGTGCACAACCTTCTAGAGATATGCACGGTGGGTTGACTGCCAATATGCTAGTACATGCTCCTGATGATTTTGATGGTATCAGGAAATTCCCTAGGATGCCTTTGGACACTGAGCCAGTTCCTAGATATGGAAATCATTCATTTGATCCACTCGAGGCAGGGAAGAGGCCAGTTGGTTTCCATGATGAGGCCATTAACAAATCAGGTGCTACTCTCCACCCTGGTTATCTTGGCCTAGGTCCTGGACATGGGAGACATCACATGGACGGTATGGCTCCCAGAAGTCCTGGTGGTGAATATCCTGATATGCCTCCCCATAGAATGCGGCCCCACTCTGGTGGGCTTGTTGGTAAGGCAGATATAGATGATTTTGATGGAAGAGCTGCACGTCATTTTGGTGAGCCATTTGGCATTGCATTCCATGATAGTCGGTTTCCTCGTCTGCCTGGTCATTTGCATAGAGATGAATTTGAGGGTTTTGGTAATTTTCGATTGGGTGAACATCCAAGGGATGGTAATTTTATTGGCCAAGATGAATTCGCTGGTCCATTTCAAAGGGGTGAACATTTTGGTCCGCATAACTTTTCAAGGCAATTGCATCAAGGGGAACCTATAGTTTATGGTGCCCGTCCTGGCTCTCGAAGTTTTGAATCTTTCAGCAAAGGAAACAGGCCAGGTCATCCGCAGCTTGGTGAACCTGGGTTCAGGAGCAGCTTTTCTCTTCCTGGTTTTCCTAATGATGCTGGATTTTTACCAGGAGAAGCCAGGCCATTTGATAATGTGAGAAGGAAGCCTGCTAGCATGGGTTGGTGCCGGATATGTAGAGTTGATTGTGAAACAGTTGAAGGTTTGGACTTGCATTCTCAAACAAGGGAGCACCAGAGGACGGCTATGGATATAGTTAAAAGCATCAAACAAAATGTGAAGAAACAAAAATTAATACCAACTGAACATTCCTCAGTCAAAGATGGAAACAAGACAAGAAACACTGATTTCAACCAAAGATATTGCTGCGGTTGCTACCATCATATTAATGGAGATGTTTTTGGGATCTCAAGTACATTGGCAATGCTAATGGTAAGGACAATACATATGAATGTTTATCTTTTGGGCTTTAGTAGAGGCCTCCATTGTCCATTGATGCCTCTGCATTATGGTATGATATGTTGTGCTGTCTAG 3888 0.4627 MGFDNECIVNIQSLAGEYFCPVCRLLVYPSEAMQSQCTHLYCKPCLTYVVSTTRACPYDGYLVTEADSKPLTESNKALAETIGKIPVHCLYHRSGCTWQGTLSECTSHCSGCVFGNSPVVCNRCGIQIVHRQVQEHAQSCPGVQSQAQQVAVTQEPSATSTVASTDQNQTAAPVGAVASQALNSQTAVTTTTSGQDSSQLPNPASQSQPTQNVQTAAPTAEQWYQQQQYQQYYLQYPGQDPYQQQYQHYYPYQQPVGPQYQQPYSQPQPQSQPQPQSQSQSQSQSQPQPQPQAQHQAQPQLQPQGVSNPLPQVPALVAPQPQNQMQVNQQQQQLQPAVTPHGQILPQSNPPGLTQALSQPQSSYPYPLVPHAVQPHPQPQQHMQIPPYQQPHSQAQHSQPQIQQPAQKYPVSQPQVHSQAHPNAPVQHLSQSQMRPHQSLTPSVQPQGQNASSNAVTGFQSYPQPQPQLHQSTQPGAPQHGMQMHAQSGPLPHAQHPVLMQNQFPQQIPVMHPHQTPVMFPNQQQPALLPSPVQGQGTPPIQQQPVFNPNQQPGPINHRPTLQPVQQSLAQQPFAHMPMSSHLRPQGPGHSFPRHSYPPAQGNPAPLNSTQLSQSQNAVGKPSIPNHPIQIQAFAHTANNIPVRPGQTGSSHLHENHNLLVGTNNQVQLSSDLQSGAPAPHERQGNATEQHTDSATGKLAKNSKDFYTASLSENELKSEKVKMDIKPIDAGNKQNGGDQNAVKTSGPNVNSLENGDSVGQSVGKEEVAENNGNEHSAPRSNENQDGPLLKMETKKESETDELNNDDAHTSRPAADHGKQHQPMTEYAAVQQRSSAMNHVPTHDPHLGQATMLKQPQGIGTQFGTPGQNFQPQSLGPAAPYNQGQEPPFHAGASNSSRIGGPRFSAQPSRDMHGGLTANMLVHAPDDFDGIRKFPRMPLDTEPVPRYGNHSFDPLEAGKRPVGFHDEAINKSGATLHPGYLGLGPGHGRHHMDGMAPRSPGGEYPDMPPHRMRPHSGGLVGKADIDDFDGRAARHFGEPFGIAFHDSRFPRLPGHLHRDEFEGFGNFRLGEHPRDGNFIGQDEFAGPFQRGEHFGPHNFSRQLHQGEPIVYGARPGSRSFESFSKGNRPGHPQLGEPGFRSSFSLPGFPNDAGFLPGEARPFDNVRRKPASMGWCRICRVDCETVEGLDLHSQTREHQRTAMDIVKSIKQNVKKQKLIPTEHSSVKDGNKTRNTDFNQRYCCGCYHHINGDVFGISSTLAMLMVRTIHMNVYLLGFSRGLHCPLMPLHYGMICCAV 1295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00978 1295 SUPERFAMILY RING/U-box 13 73 - -
Adu03g00978 1295 MobiDBLite consensus disorder prediction 773 787 - -
Adu03g00978 1295 MobiDBLite consensus disorder prediction 521 561 - -
Adu03g00978 1295 ProSiteProfiles Zinc finger RING-type profile. 20 59 IPR001841 -
Adu03g00978 1295 MobiDBLite consensus disorder prediction 860 908 - -
Adu03g00978 1295 MobiDBLite consensus disorder prediction 317 365 - -
Adu03g00978 1295 MobiDBLite consensus disorder prediction 671 701 - -
Adu03g00978 1295 MobiDBLite consensus disorder prediction 860 879 - -
Adu03g00978 1295 MobiDBLite consensus disorder prediction 728 825 - -
Adu03g00978 1295 MobiDBLite consensus disorder prediction 370 384 - -
Adu03g00978 1295 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 6 118 IPR013083 -
Adu03g00978 1295 SUPERFAMILY TRAF domain-like 84 141 - -
Adu03g00978 1295 MobiDBLite consensus disorder prediction 254 309 - -
Adu03g00978 1295 ProSitePatterns Zinc finger RING-type signature. 37 46 IPR017907 -
Adu03g00978 1295 MobiDBLite consensus disorder prediction 788 815 - -
Adu03g00978 1295 MobiDBLite consensus disorder prediction 733 758 - -
Adu03g00978 1295 MobiDBLite consensus disorder prediction 602 623 - -
Adu03g00978 1295 MobiDBLite consensus disorder prediction 185 219 - -
Adu03g00978 1295 MobiDBLite consensus disorder prediction 578 626 - -
Adu03g00978 1295 MobiDBLite consensus disorder prediction 385 481 - -
Adu03g00978 1295 MobiDBLite consensus disorder prediction 254 495 - -
Adu03g00978 1295 MobiDBLite consensus disorder prediction 887 902 - -
Adu03g00978 1295 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1A-LIKE 1 1238 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00978 - - gsj:114380210 1002.66