Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00933 ATGAGAACGATATCGGGGGCGTTTCGCTCGATCAAACGCCCAAATCTAAACCCTAATTTATCCAAATCCTCATCATCTACTGCTTCCACATCGCACCTGAATTTCAATTCCGAACCAAAATCGGAGTCTTGGTGCGTTTATCTGATCCTCTCCACCAACCACCCAATCAAAACCTACGTTGGGGTCACAACCAATTTCCCTCGCCGATTGAAGCAGCATAACGGCAAGCTTAAGGGTGGTGCAAAAGCATCCCGTGCTGGAAGGCCATGGATTTGTGCATGCCTCATTTGTGGTTTTGCAGACCGGAGCGAAGCTTGTGTGTTTGAATCAAAATGGAAAGATTTCTCAAGGAAATCTCCCCGCAAAAGTAAAGGTGGCAGCAGCTCCAAACAGATTGAAGATCCCTCACGTCCGTTGCTGCAACACAGGCAAGCAGCTTTAAATAGAGTGAAAAGCTCACTTGACTGCTCTCACTTAGAAATTAATTGGCATTTAGATCCATCGTGA 507 0.4615 MRTISGAFRSIKRPNLNPNLSKSSSSTASTSHLNFNSEPKSESWCVYLILSTNHPIKTYVGVTTNFPRRLKQHNGKLKGGAKASRAGRPWICACLICGFADRSEACVFESKWKDFSRKSPRKSKGGSSSKQIEDPSRPLLQHRQAALNRVKSSLDCSHLEINWHLDPS 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00933 168 ProSiteProfiles GIY-YIG domain profile. 42 124 IPR000305 -
Adu03g00933 168 SUPERFAMILY GIY-YIG endonuclease 43 118 IPR035901 -
Adu03g00933 168 Gene3D - 38 141 IPR035901 -
Adu03g00933 168 Pfam GIY-YIG catalytic domain 44 118 IPR000305 -
Adu03g00933 168 PANTHER EMB|CAB76036.1 19 167 - -
Adu03g00933 168 MobiDBLite consensus disorder prediction 1 38 - -
Adu03g00933 168 MobiDBLite consensus disorder prediction 116 139 - -
Adu03g00933 168 PANTHER STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX1 19 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00933 Adu-Chr3 9517479 9520503 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00933 K15078 - gmx:100805152 227.639