Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00856 ATGAGTGAGAACTTGATGGAAAAAGTGAACGCATTAGGAGAGCGTCTCAAGATTGGTGGAGTGGAAGTAGGTAGAAAGATGAGTGCCGGAATGAGTTCTATGAGCTTCAAAGTGAAGGAATTTTTCCATGGTCAAAACCATGCGGACAGGCTCGTCGAGGAGGCTACATCAGAGTCCCTCGACGAGCCTGACTGGTCTATGAACCTTCAAATCTATGACTTGATCAATGATCATGAAAGCATCAACACAGGCGAAGTGGTTCGGGCGATCAAGAGGAGGATCATGATGAGGAATAATCCGAGGATTCAGTACCTTGCATTGGTCCTTCTTGAAGCATTGCTTAAGAATTGTGACAATAAGGGATTCATGGAAGTGGCATCTGAGAGAGTTCTTGATGAGATGGTTAAACTAATTGATGATCCTTTAACAGTTTCTAGTAACCGCAACAAGGCTTTGATCATGGGTGTTGGATTTCCTGTTAGAGACAATGAAAGCTTGGCTCCAATTTTCACTCCTCCTCCTCGTCGTTCATCCTCTGCTGCTGATTCTGATGATATCATTTTACCACATCCCATTCGCTATGATATTCCCATGCGAAGCTTCACCTCTCAACCAACCACAAAGGAAGCTTTTCATGTTGCAAGAAACACCATTGAGCTTCTCTATACTATCTTATCTTCTTCACCACACCAACAACTTTTACGGGATGAACTGACAACCTCATTAGTACAACAGTGTCAAAGGTCTCGATGTGATGTGCAAAGAATAGCTGAGACTTCTGGGGACAATGAAGCACTTCTTTTTGAGGCATTGAATGTGAATGATGAGATTCAAAAGGTTCTAACTAAGTACCAAGAATTCAACAAGCCTACAGCTCCTCCTGCTCTGCCTACATTTACTCCACTCCAACCGGTCGAGGCAGAGGAATCGCCCGGCCGGAACACAACTGAAGATGATGATGATGATGATGCCTTGATTAGGAAGCCAAGTGATTCAAGGGTTGGATTGAGCCATGATGACATGATGCATGATCTTGATGAGATGATTTTTGGCAAAAAAGGTGTTGGAGATGATCCTACCAACCACCACCAATCATCAAAACATGATCTCATCTCCTTCTAA 1122 0.434 MSENLMEKVNALGERLKIGGVEVGRKMSAGMSSMSFKVKEFFHGQNHADRLVEEATSESLDEPDWSMNLQIYDLINDHESINTGEVVRAIKRRIMMRNNPRIQYLALVLLEALLKNCDNKGFMEVASERVLDEMVKLIDDPLTVSSNRNKALIMGVGFPVRDNESLAPIFTPPPRRSSSAADSDDIILPHPIRYDIPMRSFTSQPTTKEAFHVARNTIELLYTILSSSPHQQLLRDELTTSLVQQCQRSRCDVQRIAETSGDNEALLFEALNVNDEIQKVLTKYQEFNKPTAPPALPTFTPLQPVEAEESPGRNTTEDDDDDDALIRKPSDSRVGLSHDDMMHDLDEMIFGKKGVGDDPTNHHQSSKHDLISF 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00856 373 MobiDBLite consensus disorder prediction 320 365 - -
Adu03g00856 373 CDD VHS 48 154 - -
Adu03g00856 373 Gene3D - 201 290 IPR038425 -
Adu03g00856 373 PANTHER TOM1-LIKE PROTEIN 1 1 154 - -
Adu03g00856 373 Gene3D - 41 156 IPR008942 -
Adu03g00856 373 SMART VHS_2 48 177 IPR002014 GO:0035091|GO:0043130
Adu03g00856 373 PANTHER TOM1-LIKE PROTEIN 1 155 373 - -
Adu03g00856 373 ProSiteProfiles VHS domain profile. 55 154 IPR002014 GO:0035091|GO:0043130
Adu03g00856 373 Pfam VHS domain 47 140 IPR002014 GO:0035091|GO:0043130
Adu03g00856 373 PANTHER TOM1-LIKE PROTEIN 1 1 154 IPR044836 GO:0035091|GO:0043130|GO:0043328
Adu03g00856 373 PANTHER TOM1-LIKE PROTEIN 1 155 373 IPR044836 GO:0035091|GO:0043130|GO:0043328
Adu03g00856 373 Pfam GAT domain 215 288 IPR004152 GO:0035091|GO:0043130
Adu03g00856 373 ProSiteProfiles GAT domain profile. 202 289 IPR004152 GO:0035091|GO:0043130
Adu03g00856 373 SUPERFAMILY ENTH/VHS domain 43 152 IPR008942 -
Adu03g00856 373 MobiDBLite consensus disorder prediction 291 373 - -
Adu03g00856 373 SUPERFAMILY GAT-like domain 158 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00856 Adu-Chr3 8429159 8431173 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00856 - - zju:107414831 390.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00856 03 8429159 8431173 Adu03g00856 03 8429159 8431173 ECH