Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00838 ATGGCGTCGGACCCTGAACAACCTACTCTCTCCTCTTTCCCAAAGGAGAGAAAGCCACATGGTGAGATTGGGAGTGCAAGGGAGCCTCTTCTTAATGTGTCCCATGATTCTGAAAAGTATTCTGTATCTGCTGCGATTTTCCCGTTTTTCTTCCCAGCTCTTGGTGGGCTGCTGTATGGCTATGACATAGGCTCTACATCGTGTGCAACAATTTCCATTGAGTCGCCAACACTAAGTGGAGTATCTTGGTACAACTTGTCCTCCATTGAAATTGGTCTTGTTACTAGTGGATCATTATATGGTGCCTTAATTGGTTCTGTGTTGGCCTTCAATGTTGCTGACTTCCTAGGTAGAAGAAGGGAGCTGGTTTCAGCGGCATTGTTATATCTTGTCGGAGCACTCGTGACAGCACTAGCTCCAAATCTTCCTATATTGGTGATAGGGAGATTTATTTATGGTATAGGAATTGGATTGGCAGGTTATGGAATCGGTAGCCTTCTGGTAGACACGGTAGCTGGGTGGCGGTATATGTATGGAGTTAGTAGTCCTTTGGCAGTAATCATGGGAATTGGAATGTGTTGGCTCCCAGCTTCTCCTAGGTGGCTACTTTTATGTGCTATACAGGGGAAAGGGGATGGAGAAAATTTGAAAAGCACCGCAATTCATTGTCTGTGCCGTCTTCGAGGTCAAGCTGTTGATGACTCAGCTCATCGGCAAGTGGATGAAATTCTGGCTGAGCTTGCTTATGTGGGTGAAGAAAAAGAGGTTACTTTTGGAGAAATGTTCAGAGGAAAATGCTTGAAAGCCCTTACCATTGGTGCAGGATTGGTCTTGTTTCAACAGATCACAGGACAACCAAGTGTGCTTTACTATGCTGGATCAATCCTTCAGAGTGCAGGATTCTCCGCTGCATCTGATGCGACCCGAGTCTCTATTCTCCTTGGTTTTTTCAAGTTGATTATGACCGGAACTGCTGTCGCCGTTGTCGATAAAGTTGGAAGAAGACCTTTACTACTGGGAGGAGTTTCAGGGATGGCAGTATCTTTATTCCTTCTGGGTTCGTATTACATTTTCTTGGATGATGCCGCAGTCGTTGCTGTAATTGGTCTGCTGTTATATGTTGGCTGTTATCAGATTTCGTTTGGTCCAATTGGTTGGCTAATGATATCAGAGGTTTTCCCCTTGCGCTTAAGAGGTCGCGGACTAAGTATCGCTGTACTTGTTAACTTCGGCGCAAATGCTCTTGTAACATTTGCTTTCTCCCCACTGAAGGAATTACTGGGAGCAGGAATTTTGTTTTACATATTTTGTGCAATAGCAGTGGGATCTCTTGTATTCATATACTTCATTGTACCTGAAACCAAGGGACTTACCCTTGAGGAGATTGAGGCCAAATGTCTATAA 1404 0.4452 MASDPEQPTLSSFPKERKPHGEIGSAREPLLNVSHDSEKYSVSAAIFPFFFPALGGLLYGYDIGSTSCATISIESPTLSGVSWYNLSSIEIGLVTSGSLYGALIGSVLAFNVADFLGRRRELVSAALLYLVGALVTALAPNLPILVIGRFIYGIGIGLAGYGIGSLLVDTVAGWRYMYGVSSPLAVIMGIGMCWLPASPRWLLLCAIQGKGDGENLKSTAIHCLCRLRGQAVDDSAHRQVDEILAELAYVGEEKEVTFGEMFRGKCLKALTIGAGLVLFQQITGQPSVLYYAGSILQSAGFSAASDATRVSILLGFFKLIMTGTAVAVVDKVGRRPLLLGGVSGMAVSLFLLGSYYIFLDDAAVVAVIGLLLYVGCYQISFGPIGWLMISEVFPLRLRGRGLSIAVLVNFGANALVTFAFSPLKELLGAGILFYIFCAIAVGSLVFIYFIVPETKGLTLEEIEAKCL 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00838 467 Pfam Sugar (and other) transporter 158 464 IPR005828 GO:0016021|GO:0022857|GO:0055085
Adu03g00838 467 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 1 22 158 - -
Adu03g00838 467 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 1 159 467 - -
Adu03g00838 467 ProSitePatterns Sugar transport proteins signature 1. 109 126 IPR005829 GO:0016021|GO:0022857|GO:0055085
Adu03g00838 467 Gene3D MFS general substrate transporter like domains 161 465 IPR036259 -
Adu03g00838 467 Gene3D MFS general substrate transporter like domains 38 160 IPR036259 -
Adu03g00838 467 ProSiteProfiles Major facilitator superfamily (MFS) profile. 48 455 IPR020846 GO:0022857
Adu03g00838 467 SUPERFAMILY MFS general substrate transporter 41 463 IPR036259 -
Adu03g00838 467 CDD MFS_GLUT10_12_Class3_like 51 462 - -
Adu03g00838 467 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 2 159 467 - -
Adu03g00838 467 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 2 22 158 - -
Adu03g00838 467 PRINTS Sugar transporter signature 56 66 IPR003663 GO:0016020|GO:0022857|GO:0055085
Adu03g00838 467 PRINTS Sugar transporter signature 146 165 IPR003663 GO:0016020|GO:0022857|GO:0055085
Adu03g00838 467 PRINTS Sugar transporter signature 280 290 IPR003663 GO:0016020|GO:0022857|GO:0055085
Adu03g00838 467 PRINTS Sugar transporter signature 367 388 IPR003663 GO:0016020|GO:0022857|GO:0055085
Adu03g00838 467 PRINTS Sugar transporter signature 390 402 IPR003663 GO:0016020|GO:0022857|GO:0055085
Adu03g00838 467 MobiDBLite consensus disorder prediction 1 28 - -
Adu03g00838 467 ProSitePatterns Sugar transport proteins signature 1. 325 341 IPR005829 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00838 Adu-Chr3 8192355 8198292 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00838 1 467 Organic Solute Cotransporters AT5G17010 69.980 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00838 - - lja:Lj3g3v3639770.1 734.176