Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00830 ATGCTCGTTTTCTCATGCTTCGGTCGGAATACGAACGCAATAATGTGTACTTCTCAGCCTCAAACTTTTTCTCTTCCCTCTCCGATCCCGAATTGGCCTCACGGAGGAAGTTTTGCTTCTGGATTTGCAAATCTTGGTGAAATAGAAGCTTTCAAGGTCTCTAATTTTGAGTTCATTTGGAGCAGCAATGCTATGCAGGACAAAAAGAATGCTGTTGTGTTCTATAAGCCTGTCGAAATACCTCAGGGTTTCCACATCCTTGGCCATTATTGTCAACCTAGCAACAAGCCTTTAAGGGGTTTTGTGCTTGTTGCTAAGGAAGTTGAAACTAATCATTGCGATGATCACGACAAGCTACCTCCCCTGAGGAATCCCCTGAATTTTGAGTTAGTTTGGAGTTCGAATGCAGGAAATCGTGAAACTCTGAGTGGTTGTGGTTACTTTTGGATACCTGAGCCTCCAGAAGGTTACAAGGCAGTTGGATACTTGGTTACTGACAATCCTAATAAGCCTCAGTTGGATGAAATCTGCTGTGTTCGTTCTGACCTCACTGATAAATGCGAGCCTTACCGCCTATTACTCGCTGTAAATTCTAAAATTCCAGAGCTTTCTTTTCAGGCTTGGAACTTGAGACCTTGTGATCGCAGCGTGCAAGGGCAAGGAGTTCCAGTTGGGTCCTTTTTCTGTAGTAACGGATGCTGGAACATCGGTGAAGAGCTTCCAATTGCATGCTTGAGGAACCTAAATCCTGTTCAACAAACAATGCCAAACCTGGAACAGATACATGCACTTATCCAGCATTATGGTCCTACCATTTTCTTTCATCCGGAAGAAGTTTACTTGCCATCTTCTGTGGTCTGGTATTTCAACAATGGAGCTTGCTTGTACAGAAAGGGTGTGACTACAGGCGAGGCAATTGATGAAACCGGCTCAAATCTACCTCGTGGAGGAACGAATGACAAGGAGTTTTGGATAGACTTGCCAAGTGATGATAGAAAGGACTTTCTCAAACGTGGGGACTTGCAAAGTGCAAGGCTTTATGTTCATGTGAAGCCGGCACTTGGTGGAACTTTCACAGACATTGCAATGTGGATTTTCTGTCCATTCAATGGACCAGCCACTCTTAAAATTGGAATGAAAAACATACCTTTAAGCAAGATTGGAGAGCATGTTGGTGATTGGGAGCATTTCACACTTAGAATATGCAATTTCAATGGAGAATTATACAGTATATACTACTCACAGCATAGTGGGGGAGAATGGGTTGATGCATATGATTTAGAATACATTGATGGAAACAAAGCTATTGTTTACTCTTCAAAAAATGGGCATGCTAGTTACCCTCATCCTGGAACCTTTATCCAAGGTTCTTCAAAACTTGGAGTTGGGATCAGAAACGATGCGTGTCGAAGCAACTTTTATGTGAATTCAAGTGTTCACTATGAGATTGTTGCAGCTGAATATCTTGGAGATGCTGTCAAGGAGCCTCTGTGGTTGCAGTATATGAGAGAGTGGGGGCCAAAAATCGTTTATGATTCGAGAACTGAGATTGATAGGATAATCGATGCGCTTCCGCGAATGCTTCGGTTCTCAGTGAAGAACTTCTTTAACAAGCTTCCAGTGGAGCTGTATGGTGAGGAAGGTCCTACAGGGCCAAAAGAGAAAAACAATTGGACAGGAGATGAAAGATGGTGA 1695 0.4295 MLVFSCFGRNTNAIMCTSQPQTFSLPSPIPNWPHGGSFASGFANLGEIEAFKVSNFEFIWSSNAMQDKKNAVVFYKPVEIPQGFHILGHYCQPSNKPLRGFVLVAKEVETNHCDDHDKLPPLRNPLNFELVWSSNAGNRETLSGCGYFWIPEPPEGYKAVGYLVTDNPNKPQLDEICCVRSDLTDKCEPYRLLLAVNSKIPELSFQAWNLRPCDRSVQGQGVPVGSFFCSNGCWNIGEELPIACLRNLNPVQQTMPNLEQIHALIQHYGPTIFFHPEEVYLPSSVVWYFNNGACLYRKGVTTGEAIDETGSNLPRGGTNDKEFWIDLPSDDRKDFLKRGDLQSARLYVHVKPALGGTFTDIAMWIFCPFNGPATLKIGMKNIPLSKIGEHVGDWEHFTLRICNFNGELYSIYYSQHSGGEWVDAYDLEYIDGNKAIVYSSKNGHASYPHPGTFIQGSSKLGVGIRNDACRSNFYVNSSVHYEIVAAEYLGDAVKEPLWLQYMREWGPKIVYDSRTEIDRIIDALPRMLRFSVKNFFNKLPVELYGEEGPTGPKEKNNWTGDERW 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00830 564 PANTHER PROCESSING PROTEIN PRP39, PUTATIVE-RELATED 5 564 - -
Adu03g00830 564 PANTHER - 5 564 - -
Adu03g00830 564 Pfam Vacuolar protein sorting-associated protein 62 20 562 IPR009291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00830 Adu-Chr3 8077368 8079613 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00830 - - gmx:100811439 850.121