Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00808 ATGCTTTCTCGTTTGATTCCAAAACCCTACTCCCATCTCAGACGCTTCCTCTCTCCCTCCCCAAAACCCTACACGTTCCCGCCGCAAACCAAAATCCCCAATTTGCCCCTCAATCCCTTCTTCACCGCCACTCCCAAACCCTTCTCCACCAACAACAATAACAATGGCAAGGGGAAGGAACCGTATTCTCCACCCGCGTGGAAGGACTTTCGCGACACTGAAGAAAATTTCCCTGCTTTCTTCGACGATGAAGAAATGAACAACATGCCTCCGGGGGAAAATCGAGGAGGAGAAGAAGAATGTTTTCCTTTGGGGAGGAAGGAGGAGAATAAGGTGGTGGAGGAGGAGAAATGGTACTTGCAAGAGAAGGGTGTTGATGATGAAGATGAGAGTTCAATATTCAAAGGGATTGATAATGAGGGAAATAAAGTAAAAGATGGTTCTGGTGGGCACCTTGGGGTGGGTGCATCGGATTTTCAACCTTGGAGCTTGAAGGAGGAGAAGGATGGTGATGAAGTGAAGGAAGATGATGTGTTTGCTTTTCAAGACGAGAATATTGAAGGGATGAAGGGTGAGTTCAGTGCTGTGGAAGGTGAAAAAAGTAAGGAAGATATTGAGAAGCTTGAGAAGGAAGAGAAAGAGCTCACTGCTGTACTCAAAGGCCCAAACCGAGCTTTTGGTGATTTGATTGCTGCTTCTGGAATCACGGATGAAATGCTTGACAGTTTGATTGCGTTGAAAGACTTAGAAGGAGTCGAGGGATTGCCCCCTCTTAGAGTAATAGAAGACATGCGCTACGAGAGGAATACTAGAAAATCCACTAGAGCTGAAATGGAGCGTCTAAAGCAAGAGGAAGCTGCAAAAGCAAGAGTGAGACAAGTTGACGAGAAAGGACGTGCTTATGGAACGGGAAGAAGAAAATGTAGCATAGCACGTGTCTGGGTTCAACCTGGTGATGGTAAATTTATTGTTAATGATAAAGAATTTGATGTTTATTTCCCTATGCTTGAGCATCGTGCTACTCTCCTTCGACCTTTCTCCGAGACAAAGACATTAGGACTTTGGGATGTCAGTTGTACTGTGAAAGGAGGCGGTGTTTCAGGTCAAGTTGGAGCAATACGATTGGGAATCAGCAAGGCTTTGCAAAGCTGGGAACCAGATTTGCGTCCTGCACTAAGAAACGCTGGCTTCCTGACAAGGGACGCAAGAGTGGTAGAGAGGAAAAAACCAGGAAAGGCCAAAGCAAGAAAAAGCTTCCAATGGGATTTGATGGCCAATGATGATACTGTAATTGTAGAAAATTTTGTTTACCCGGAATTATCATATCATATTGTTATGATTCATTCACTTTTTGGAGAGAACTCCTGTATCACCACCAATTCACCATTCATAATTCCCAATTCAGCACGCAGAGGACGACGACGAAGAACAAAGTGGGAGAAGGAAGAAGATAAAGCAATGAAGGTGGTTCCGTTCACGCTGCTTGCTTTGCTTCTTGTTGCTATTGTTCCAAATGGATTGTTGGCAGTTCCTTCTACGGTCCCTGCATTTCTTTGGTCTTCCCATTATGACCTGGTTTCAGAAAATGGCATGAAGGATTCTGTAAATTATCAGATCATTTCTCCAAAAGATCTAGCAAAGTCTGTTTTAGCTGAAGCTGGCTGGTCAAATTTTCTGTGCAATGGAAAGGAATTTCAGGAGCCTTTGGATCTGGCCCTTTTATTCATTGGTAGAGAGTTACAATCGTCAGATTTAAGCATGAGCAATCATGAAGACTCAACTCTTTTAGACTTGCTCAAGCTGTCTTTCACCAGGTCCAACATTTCCATGGCATTTCCATATGTTTCTTCATCAGAGGATGAGAATTTGGAAAAACAATTGGTTTCAGGATTCGCCGAATCCTGTGGAGATGATTTGGGAATTGGCAAAGTTGTATTCCTTGGATCTTGCTCCATGGATGATACAAATGATGAAGACAGTGCTGCTTTTCACTCTGTTCAGGAATATTTGAACAAGAAGATGGAAGGGAGTCGTACTGGGAAAACAGATTTGCTTGTGTTCTGTAATGGAGGTTCTCAACCTCTTAACATTGATGAGAAGCCAAAATCTGAAGGTGAAGTTTTATCTGGGCTTGTCAGCTCTGTTGATAAATCTGGGGCCAAATATGCAGTTCTTTATGTGTCAGATCCCTCCAGGTTGGTCCGGTATCCTTCTTACAGGGAACTACAAAGGTTTCTAGAAGAAACCACAAATGCGTCACTGACAGCCAATTCCACAGTTTGCGATGGAGTCTGCCAGATTAAGTCCTCTCTTCTGGAGGGAATTTTAGTGGGAATCGTTTTGCTAATAATCTTGATCTCTGGCCTTTGCTGTATGATGGGAATTGATACCCCAACAAGATTTGAGACTCCACAAGAGCAATGA 2424 0.4352 MLSRLIPKPYSHLRRFLSPSPKPYTFPPQTKIPNLPLNPFFTATPKPFSTNNNNNGKGKEPYSPPAWKDFRDTEENFPAFFDDEEMNNMPPGENRGGEEECFPLGRKEENKVVEEEKWYLQEKGVDDEDESSIFKGIDNEGNKVKDGSGGHLGVGASDFQPWSLKEEKDGDEVKEDDVFAFQDENIEGMKGEFSAVEGEKSKEDIEKLEKEEKELTAVLKGPNRAFGDLIAASGITDEMLDSLIALKDLEGVEGLPPLRVIEDMRYERNTRKSTRAEMERLKQEEAAKARVRQVDEKGRAYGTGRRKCSIARVWVQPGDGKFIVNDKEFDVYFPMLEHRATLLRPFSETKTLGLWDVSCTVKGGGVSGQVGAIRLGISKALQSWEPDLRPALRNAGFLTRDARVVERKKPGKAKARKSFQWDLMANDDTVIVENFVYPELSYHIVMIHSLFGENSCITTNSPFIIPNSARRGRRRRTKWEKEEDKAMKVVPFTLLALLLVAIVPNGLLAVPSTVPAFLWSSHYDLVSENGMKDSVNYQIISPKDLAKSVLAEAGWSNFLCNGKEFQEPLDLALLFIGRELQSSDLSMSNHEDSTLLDLLKLSFTRSNISMAFPYVSSSEDENLEKQLVSGFAESCGDDLGIGKVVFLGSCSMDDTNDEDSAAFHSVQEYLNKKMEGSRTGKTDLLVFCNGGSQPLNIDEKPKSEGEVLSGLVSSVDKSGAKYAVLYVSDPSRLVRYPSYRELQRFLEETTNASLTANSTVCDGVCQIKSSLLEGILVGIVLLIILISGLCCMMGIDTPTRFETPQEQ 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00808 807 Coils Coil 198 218 - -
Adu03g00808 807 Hamap 30S ribosomal protein S9 [rpsI]. 295 424 IPR023035 -
Adu03g00808 807 PANTHER 2-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLYLTRANSFERASE 487 806 - -
Adu03g00808 807 ProSitePatterns Ribosomal protein S9 signature. 363 381 IPR020574 GO:0003735|GO:0005840|GO:0006412
Adu03g00808 807 Coils Coil 264 284 - -
Adu03g00808 807 MobiDBLite consensus disorder prediction 82 103 - -
Adu03g00808 807 MobiDBLite consensus disorder prediction 44 59 - -
Adu03g00808 807 Gene3D - 292 422 IPR014721 -
Adu03g00808 807 Pfam V0 complex accessory subunit Ac45/VOA1 transmembrane domain 771 802 IPR046756 -
Adu03g00808 807 SUPERFAMILY Ribosomal protein S5 domain 2-like 299 421 IPR020568 -
Adu03g00808 807 MobiDBLite consensus disorder prediction 44 69 - -
Adu03g00808 807 MobiDBLite consensus disorder prediction 137 158 - -
Adu03g00808 807 Pfam Ribosomal protein S9/S16 304 421 IPR000754 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00808 Adu-Chr3 7791823 7798316 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00808 K02996 - gmx:100797241 521.546