Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00784 ATGGTTTCCAGAAGTTTGCATGAAAATCTTCTTAAGATTGCCTTATGGTCTCGATCAAACAGTACAAGTTCTTCTTTGGCAACAGACAACACCACTAATGATGCACGGTTCAAGGGCCATGATATGCTTGCCCCTTTCACAGCTGGGTGGCAGACAACTGATGTGAATCCTTTGGTTATAGACAAGTCAGAGGGAAGCTATGTATATGACATTAATGGGAAGAAGTATCTTGACTCACTTGCTGGTCTATGGTGCACAGCTCTAGGGGGGAATGAGCCACGTCTAGTTGAAGCTGCCACTGCACAACTGAACAAATTGCCATTTTACCATTCCTTTTGGAATCGGACTACAAAACCCTCTCTGGATCTAGCCAAGGACCTCCTAGAAACGTTCACAGCCAGAAAGATGGCGAAAGCTTTTTTTGTTAATAGCGGATCAGAAGCAAATGACACTCAGGTGAAACTTGTATGGTATTATAACAACGCACTTGGAAGACCAAATAAAAAGAAATTCATAGCTCGTGCTAAATCGTATCATGGTTCAACATTGATAGCAGCCAGTCTTTCTGGACTTCCAGCTCTGCATCAAAAATTTGATCTGCCTGCTCCTTTTGTCTTACACACTGATTGTCCACATTACTGGCGGTTTCATCTTCCAGGTGAGACAGAGGAAGAGTTTTCAACCAGATTAGCCAAAAATCTAGAGGAGCTAATTCTGAAAGAGGGACCAGATACAATTGCTGCATTTATTGCTGAGCCAGTTATGGGGGCAGGAGGTGTAATACCTCCACCTGCAACTTATTTCGAAAAGATCCAAGCTGTTGTCAAGAAGTATGACATTCTTTTTATTGCTGATGAGGTGATCTGTGCCTTTGGAAGACTTGGGACAATGTATGGATGTGACAAGTATGGCATCAAGCCCGATCTTGTCTCCTTAGCAAAGGCACTCTCGTCTGCATATTTGCCAATTGGAGCAGTTCTTGTGAGTCCAGAAGTTTCAGAAGTTATACACTCACAGAGCAACAAGCTTGGTTCATTTTCCCATGGGTTTACTTACTCTGGACACCCTGTATCCTGTGCTGTTGCAATTGAAGCACTGAAGATCTACAAAGAAAGAAATATTGTCGAGAAGGTGGCAAATATCTCCCCAAGGTTCCAAGATGGTGTAAAAGCTTTTGCTGACAGTCCTATCATTGGAGAGATCCGAGGAACTGGCTTAATTTTGGGTACCGAGTTCACAGACAATAAGTCACCTAATGATCCATTTCCTCCTGAATGGGGGGTTGGTGCCTATTTTGGAGCACAATGTGAGAAGCATGGTATGTTAGTTCGTGTAGCTGGGGATAACATTATGATGTCTCCACCGTTCATCATTTCTCCTGAAGAAGTTGATGAGTTAATAAGCATTTATGGGAAAGCCCTAAAAGGTACGGAAGAGAGGGTAAAAGAGCTCAAGTCTCAGCGGAAGTAG 1470 0.4306 MVSRSLHENLLKIALWSRSNSTSSSLATDNTTNDARFKGHDMLAPFTAGWQTTDVNPLVIDKSEGSYVYDINGKKYLDSLAGLWCTALGGNEPRLVEAATAQLNKLPFYHSFWNRTTKPSLDLAKDLLETFTARKMAKAFFVNSGSEANDTQVKLVWYYNNALGRPNKKKFIARAKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLAKNLEELILKEGPDTIAAFIAEPVMGAGGVIPPPATYFEKIQAVVKKYDILFIADEVICAFGRLGTMYGCDKYGIKPDLVSLAKALSSAYLPIGAVLVSPEVSEVIHSQSNKLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEKVANISPRFQDGVKAFADSPIIGEIRGTGLILGTEFTDNKSPNDPFPPEWGVGAYFGAQCEKHGMLVRVAGDNIMMSPPFIISPEEVDELISIYGKALKGTEERVKELKSQRK 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00784 489 Gene3D - 92 374 IPR015421 GO:0003824
Adu03g00784 489 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 282 319 IPR005814 GO:0008483|GO:0030170
Adu03g00784 489 SUPERFAMILY PLP-dependent transferases 43 475 IPR015424 -
Adu03g00784 489 CDD OAT_like 57 474 IPR005814 GO:0008483|GO:0030170
Adu03g00784 489 PANTHER GAMMA AMINOBUTYRATE TRANSAMINASE 1, MITOCHONDRIAL 5 484 - -
Adu03g00784 489 Pfam Aminotransferase class-III 56 473 IPR005814 GO:0008483|GO:0030170
Adu03g00784 489 Gene3D Aspartate Aminotransferase, domain 1 58 474 IPR015422 GO:0003824
Adu03g00784 489 PANTHER ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE AMINOTRANSFERASE 5 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00784 Adu-Chr3 7450620 7457317 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00784 K16871 - pvy:116112175 879.011