Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00738 ATGATAAATGGCCAATGCATGTTTGGACATTTGAGTGCTGCCGAGTCTTTGTTCGCTCGGATGATCAATAATGGTTTGGAGCCTACTGCGACAACCTTTACGCCGTTGATTAGTAGATATTGCAAAGATCTACAACTACGAAAAGCATTCCAACTGTATGATATGATGATTGAAAAAGGAATTGCCCCAAATGTGTATACCTTCACTGCGCTTATTTCTGGGGTTTGCAGTGCAAATAATATGGCTGAAGCATCCAAACTTTTTGTTGAAATGGTGGAAAAGAAAATCACCCCAAATGAGGTAACATATAATGTTATGATTGAAGGGTATTGTAGGAGTGGTAAAATTGACAAGGCCTTTGAATTACTTGATGAGATGCTTCAGAAAGGCCTTGTTCCGGACACATATACCTACAGACCTCTTATCAGTGGCCTTTGTTCTGCTGGCAGGGTTTCAGATGCTAAAAATTTTGTTGATGTTCTACACAAACAGGACCGTAAATTAAACGAGATGTGCTATAGTGCACTTCTACATGGTTATTGCCAAGAAGGAAGATTGGTGGAGGCATTGAGCACTGCTTCTGATATGATTCAAAGAGGAATCAATGTAGATTTGGTTTGCCATGCTGTTCTCATCGACGGTTCACTGAAGCAACTAGATAGGAAAACACTATTTGGTCTCTTAAAACAGATGCAGGATCATGGATTGAAACCTGATAATGTAATATATACAAGTATGATCGATGCATTCAGCAAAGAAGGATCTTTTGAGAAGGCTTTCCAGTGTTGGGATTTGATGCTTACGGAGGAATGCTTTCCCAATGTTGTAACATATACTGCTTTGATGAATGGTCTATGCAAGGCGGGTGAAATGGACAGAGCAGGTCTTCTCTTTAAAAAAATGATGGCTGCAAATGTCCCTCCAAATTCAATCACATATGGCTGTTTTCTTGATCGTCTTACCAGCGAAGGGCATATGGAGGAAGCTATGGGTCTCCACCATGCAATGCTTAAAGGGCTTTTGGCGAACACTGTAACATACAACATCCTTATTCGTGGCTTCTGCAAGTTAGGTAGATTTAACGAAGCCAGCAAGGTGCTTTCTGAAATGACCGAAAATGGCATTTTCCCCGACTGTATTACCTATTCAACTTTAATTTATGAGTACTGCAGAAGTGGCAACGTAGGAGAAGCAGTTACATTGTGGGATACCATGCTAAACAAAGGTCTTGAGCCGGACTTGGTTGCATATAACTTGTTACTATATGGTTGTTGTGTTAATGGAGAGCTCAACAAAGCATTTGAGTTGCGCGATGACTTGCTGAGGAGAGGGGTGAAGCCAAGGCAAAATTTTCGAGTACTGCACAGGGGGCAATGTAGCAGCAGGAGCAGCGGTTAA 1398 0.4134 MINGQCMFGHLSAAESLFARMINNGLEPTATTFTPLISRYCKDLQLRKAFQLYDMMIEKGIAPNVYTFTALISGVCSANNMAEASKLFVEMVEKKITPNEVTYNVMIEGYCRSGKIDKAFELLDEMLQKGLVPDTYTYRPLISGLCSAGRVSDAKNFVDVLHKQDRKLNEMCYSALLHGYCQEGRLVEALSTASDMIQRGINVDLVCHAVLIDGSLKQLDRKTLFGLLKQMQDHGLKPDNVIYTSMIDAFSKEGSFEKAFQCWDLMLTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKKMMAANVPPNSITYGCFLDRLTSEGHMEEAMGLHHAMLKGLLANTVTYNILIRGFCKLGRFNEASKVLSEMTENGIFPDCITYSTLIYEYCRSGNVGEAVTLWDTMLNKGLEPDLVAYNLLLYGCCVNGELNKAFELRDDLLRRGVKPRQNFRVLHRGQCSSRSSG 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00738 465 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 239 273 IPR002885 -
Adu03g00738 465 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 378 412 IPR002885 -
Adu03g00738 465 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 343 377 IPR002885 -
Adu03g00738 465 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 29 63 IPR002885 -
Adu03g00738 465 Gene3D Tetratricopeptide repeat domain 323 464 IPR011990 GO:0005515
Adu03g00738 465 PANTHER OS07G0300200 PROTEIN 227 461 - -
Adu03g00738 465 Pfam PPR repeat 408 438 IPR002885 -
Adu03g00738 465 Gene3D Tetratricopeptide repeat domain 219 322 IPR011990 GO:0005515
Adu03g00738 465 Gene3D Tetratricopeptide repeat domain 1 79 IPR011990 GO:0005515
Adu03g00738 465 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL 227 461 - -
Adu03g00738 465 PANTHER OS07G0300200 PROTEIN 102 318 - -
Adu03g00738 465 PANTHER OS07G0300200 PROTEIN 1 222 - -
Adu03g00738 465 Pfam PPR repeat family 238 287 IPR002885 -
Adu03g00738 465 Pfam PPR repeat family 343 391 IPR002885 -
Adu03g00738 465 Pfam PPR repeat family 98 147 IPR002885 -
Adu03g00738 465 Pfam PPR repeat family 32 77 IPR002885 -
Adu03g00738 465 Pfam PPR repeat family 169 214 IPR002885 -
Adu03g00738 465 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL 1 222 - -
Adu03g00738 465 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL 102 318 - -
Adu03g00738 465 TIGRFAM PPR: pentatricopeptide repeat domain 415 447 IPR002885 -
Adu03g00738 465 TIGRFAM PPR: pentatricopeptide repeat domain 172 204 IPR002885 -
Adu03g00738 465 TIGRFAM PPR: pentatricopeptide repeat domain 345 379 IPR002885 -
Adu03g00738 465 TIGRFAM PPR: pentatricopeptide repeat domain 380 413 IPR002885 -
Adu03g00738 465 TIGRFAM PPR: pentatricopeptide repeat domain 136 169 IPR002885 -
Adu03g00738 465 TIGRFAM PPR: pentatricopeptide repeat domain 101 135 IPR002885 -
Adu03g00738 465 TIGRFAM PPR: pentatricopeptide repeat domain 1 29 IPR002885 -
Adu03g00738 465 TIGRFAM PPR: pentatricopeptide repeat domain 66 100 IPR002885 -
Adu03g00738 465 TIGRFAM PPR: pentatricopeptide repeat domain 32 65 IPR002885 -
Adu03g00738 465 TIGRFAM PPR: pentatricopeptide repeat domain 241 275 IPR002885 -
Adu03g00738 465 TIGRFAM PPR: pentatricopeptide repeat domain 276 309 IPR002885 -
Adu03g00738 465 Gene3D Tetratricopeptide repeat domain 80 218 IPR011990 GO:0005515
Adu03g00738 465 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 413 447 IPR002885 -
Adu03g00738 465 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 169 203 IPR002885 -
Adu03g00738 465 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 99 133 IPR002885 -
Adu03g00738 465 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 134 168 IPR002885 -
Adu03g00738 465 SUPERFAMILY HCP-like 250 442 - -
Adu03g00738 465 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1 28 IPR002885 -
Adu03g00738 465 Pfam PPR repeat 311 338 IPR002885 -
Adu03g00738 465 Pfam PPR repeat 1 26 IPR002885 -
Adu03g00738 465 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 64 98 IPR002885 -
Adu03g00738 465 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 274 308 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00738 Adu-Chr3 6867890 6869287 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00738 8 463 Glycosyltransferase AT1G05670 31.373 2.18e-76 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00738 - - adu:107477233 944.495