Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00705 ATGAACATCTCTTTATGCATCATAACACTACTACTGTTGCACTTAGGCTTATTTTTAGGGGCAAGCTTAGCCTACTCCTCAAGCTTCAACTATGGTGATGCTGTTGACAAGAGCTTGATGTTCTTTGAAGCTCAAAGGTCTGGTAAATTGCCACCTCAGCAGCGAGTCAAGTGGCGTGGTGATTCTGGCCTCAATGATGGACTTTCACAAGGAGTGGACCTTGTGGGAGGGTACTATGATGCTGGGGATCATGTGAAGTTTGGGCTGCCAATGGCATATAGTGTGACAATGCTTGCATGGGGAGCCATTGAGTTCAGAAAAGAGATCACTGACTTGAACCAAATGGGACACACTTTATGGGCCATTAAATGGGGAACTGATTACTTCCTCAAAGCACATCCTCAGCCTAATGTTCTTTGGGGACAGGTGGGGGATGGAGCCTCGGATCACTATTGCTGGGAGCGTGCTGAAGACATGACAACTTCAAGAACTGCCTATAAAGTTGATGAAGAGCATCCTGGCTCTGATATTGCAGGTGAAACTGCAGCTGCATTGGCTGCAGCATCCATAGCCTTCAAGCCCTACAACTCTTCTTACTCTAATCTTCTCCTAATTCATGCAAAACAGCTCTTCACATTTGCAGATAGGTTCAGGGGTCTATATGATGATTCCATAACTAGTGCTCAGCAATTCTACACTTCTTCCGGTTACTCAGATGAACTATTATGGGCTGCAGCATGGTTGCATCAAGCAACTGATGATGAATACTACCTAAAGTATGTAGTGGACAATGCTGTGTACATGGGTGGAACTGGCTGGGCAGTGAAGGAGTTCTCTTGGGACAATAAATATGCCGGTGTACAAATCCTCTTGTCGAAGGTGTTACTAGAAGGAAAGGCTGGTTCATATGCCTCTACACTGAAGCAGTACCAAGCCAAGGCAGATTATTTTACCTGTGCTTCCTTGCAAAAGAATGATGGTTACAATGTCCAGAAGACTCCAGGTGGTCTAGTATACGTGCGCGAATGGAACAACATGCAGTATGTTTCTTCTTCTGCATTTCTCTTGGTTGCTTACTCTAAGTATCTATCAGATGCAAAAACTCAGATTAATTGTCCAGATGGACAAGTTCAGCCTCAGGAGCTCCTCAATTTTGCAAAATCACAGGCATGTCATATAACTATATTCTATTGGAGTTTTGCTGATTACATCCTTGGCAAAAACCCTGAGGGATCAGCTCCTCTTGTAGGCATCTTTGCTAAGCTGCAGAGTTTATATGGCAATTCAGGTTACTACCATAAGGAATCATCAGTGCCCCACCCCAAAACACCAAATACCACAAGCTCATGGAAAACATCATTGTCTAAAACATTAGAAGGTGCACCAATTGAGTTCCTTCACTCAATTACTAGCTCATGGACTGTTGGGGCTACAACTTATTACCGCCACAGAGTGATCATCAAGAACACTTCTTTGGAGCCAATAACAGATCTCAAGTTGGTGATTGAGAATCTCTCAGGATCTATATGGGGTCTATCTCCAACAAATGAGAAGAACATTTATGAACTTCCACAATGGCTCAATGTCTTGAATCCTGACTCAGAGTGTATGTTTGTTTATGTTCAAGAAGGACCACAAGCAAAGATCAGTGTTCAAAGCTTCCATTGA 1668 0.4335 MNISLCIITLLLLHLGLFLGASLAYSSSFNYGDAVDKSLMFFEAQRSGKLPPQQRVKWRGDSGLNDGLSQGVDLVGGYYDAGDHVKFGLPMAYSVTMLAWGAIEFRKEITDLNQMGHTLWAIKWGTDYFLKAHPQPNVLWGQVGDGASDHYCWERAEDMTTSRTAYKVDEEHPGSDIAGETAAALAAASIAFKPYNSSYSNLLLIHAKQLFTFADRFRGLYDDSITSAQQFYTSSGYSDELLWAAAWLHQATDDEYYLKYVVDNAVYMGGTGWAVKEFSWDNKYAGVQILLSKVLLEGKAGSYASTLKQYQAKADYFTCASLQKNDGYNVQKTPGGLVYVREWNNMQYVSSSAFLLVAYSKYLSDAKTQINCPDGQVQPQELLNFAKSQACHITIFYWSFADYILGKNPEGSAPLVGIFAKLQSLYGNSGYYHKESSVPHPKTPNTTSSWKTSLSKTLEGAPIEFLHSITSSWTVGATTYYRHRVIIKNTSLEPITDLKLVIENLSGSIWGLSPTNEKNIYELPQWLNVLNPDSECMFVYVQEGPQAKISVQSFH 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00705 555 Gene3D - 27 464 IPR012341 GO:0005975
Adu03g00705 555 PANTHER ENDO-1,4-BETA-GLUCANASE 411 510 - -
Adu03g00705 555 SUPERFAMILY Six-hairpin glycosidases 28 432 IPR008928 GO:0005975
Adu03g00705 555 SMART CBM49_2 463 545 IPR019028 GO:0030246
Adu03g00705 555 Pfam Carbohydrate binding domain CBM49 463 542 IPR019028 GO:0030246
Adu03g00705 555 Pfam Glycosyl hydrolase family 9 31 421 IPR001701 GO:0004553|GO:0005975
Adu03g00705 555 PANTHER ENDOGLUCANASE 5 10 410 - -
Adu03g00705 555 PANTHER ENDOGLUCANASE 5 411 510 - -
Adu03g00705 555 PANTHER ENDO-1,4-BETA-GLUCANASE 10 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00705 Adu-Chr3 6570121 6574418 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00705 411 555 Glycoside Hydrolase AT1G48930 54.730 2.04e-36 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00705 K01179 - ahf:112789008 781.941