Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00690 ATGCGCACAGCAACATTACTACTCCACTTGTGGTTTGAAAATACACATCACTTCCTCATATTTGTGGTACTTGTTGTAGATGACAAGAAATCAAATGTGACTCAGAATGTTGATGCTGCTAACGAGAAATTGGATGCCTGGACATCCCATAAGACTGAAATAGGAGTTGTATACTATTATAATGCCTTGACAGGAGAATCAACATATGATAAACCTGCTGGCTTTAAAGGCGAGCCTCACCAAATTGCTGTGCAGCCAACTCCAGTTTCAATGGTGGATATACCGGGTACAGATTGGATGTTGGTCTCCACTAGTGATGGGAAGAAAAATTACTACAACAAACAAACCAAGACAAGCTGCTGGGAAGTTCCAAATGAGGTAGCTGAATTGAAAAAGCAGGATGGTGATGTCACAAAAGATCATTCAATGTCAGTTCCAAATACTAATGTATTGTCTGGTAGAGGGTCTGGAATGGTTACTCTGAATACTCCTGCTATTAATACTGGTGGTCGTGATGCTGCAGCTCTTAAACCCTCTAGTGTTCAGAGCTCACCATCGGCACTGGATTTGATCAAGAAGAAGCTGCAGGAGTCTGGAATGCCTGTTGCTTCCTCTGCTGTTCCTGTCTCACCAGTACAAACAGGATCTGAAACAAATGGTTCCAAAGCAGCTGAATCTGCAGCAAAGGGCCAGGATAAGTTGAGGGATAGAGAACGGGAGCTTTGGAAAAGGAAGCAAACTAAGGAGCAGGAAATGGAAAGGGTGCGGGTGAAAATCCAAAGAAAGGAGGCAATCACTTCTTTTCAACCTTTACTTGTGGAGACAATCAAAGACTCTTTGGTACAACACTCATTCTATAGGCGGGATCTCGTGAAGCGTCTTTTGAAATCTGATCCAAGATATAACAAAGTTCCAAGGAAAGACAGGGAACCCTTGTGGCGCCGAGATGTGCAGCGGCGGCAAAAGTCATCCCAGGAAGAGAAAAACACAGATACTAAGGGTAGAAACACATTAGAATCTATTAAACTTGCGTTGGAAGCTGGGAGATCCCACGAGAGAAGATGA 1065 0.4338 MRTATLLLHLWFENTHHFLIFVVLVVDDKKSNVTQNVDAANEKLDAWTSHKTEIGVVYYYNALTGESTYDKPAGFKGEPHQIAVQPTPVSMVDIPGTDWMLVSTSDGKKNYYNKQTKTSCWEVPNEVAELKKQDGDVTKDHSMSVPNTNVLSGRGSGMVTLNTPAINTGGRDAAALKPSSVQSSPSALDLIKKKLQESGMPVASSAVPVSPVQTGSETNGSKAAESAAKGQDKLRDRERELWKRKQTKEQEMERVRVKIQRKEAITSFQPLLVETIKDSLVQHSFYRRDLVKRLLKSDPRYNKVPRKDREPLWRRDVQRRQKSSQEEKNTDTKGRNTLESIKLALEAGRSHERR 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00690 354 ProSitePatterns WW/rsp5/WWP domain signature. 47 72 IPR001202 GO:0005515
Adu03g00690 354 PANTHER TRANSCRIPTION ELONGATION REGULATOR 1 33 204 IPR045148 GO:0003712|GO:0070063
Adu03g00690 354 PANTHER TRANSCRIPTION ELONGATION REGULATOR 1 291 339 IPR045148 GO:0003712|GO:0070063
Adu03g00690 354 PANTHER TRANSCRIPTION ELONGATION REGULATOR 1 218 290 IPR045148 GO:0003712|GO:0070063
Adu03g00690 354 MobiDBLite consensus disorder prediction 202 236 - -
Adu03g00690 354 SUPERFAMILY WW domain 46 76 IPR036020 GO:0005515
Adu03g00690 354 MobiDBLite consensus disorder prediction 140 156 - -
Adu03g00690 354 CDD WW 47 72 IPR001202 GO:0005515
Adu03g00690 354 Gene3D FF domain 257 318 IPR036517 -
Adu03g00690 354 MobiDBLite consensus disorder prediction 302 335 - -
Adu03g00690 354 SUPERFAMILY WW domain 98 130 IPR036020 GO:0005515
Adu03g00690 354 MobiDBLite consensus disorder prediction 302 354 - -
Adu03g00690 354 SMART ww_5 42 74 IPR001202 GO:0005515
Adu03g00690 354 SMART ww_5 94 126 IPR001202 GO:0005515
Adu03g00690 354 Gene3D - 85 143 - -
Adu03g00690 354 Gene3D - 27 84 - -
Adu03g00690 354 PANTHER TRANSCRIPTION ELONGATION REGULATOR HOMOLOG 33 204 - -
Adu03g00690 354 PANTHER TRANSCRIPTION ELONGATION REGULATOR HOMOLOG 291 339 - -
Adu03g00690 354 PANTHER TRANSCRIPTION ELONGATION REGULATOR HOMOLOG 218 290 - -
Adu03g00690 354 MobiDBLite consensus disorder prediction 133 156 - -
Adu03g00690 354 ProSitePatterns WW/rsp5/WWP domain signature. 99 124 IPR001202 GO:0005515
Adu03g00690 354 CDD WW 104 126 IPR001202 GO:0005515
Adu03g00690 354 Coils Coil 245 265 - -
Adu03g00690 354 MobiDBLite consensus disorder prediction 207 225 - -
Adu03g00690 354 ProSiteProfiles WW/rsp5/WWP domain profile. 47 74 IPR001202 GO:0005515
Adu03g00690 354 Pfam WW domain 46 72 IPR001202 GO:0005515
Adu03g00690 354 ProSiteProfiles WW/rsp5/WWP domain profile. 99 126 IPR001202 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00690 Adu-Chr3 6416825 6419663 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00690 K12824 - gmx:100815386 327.791