Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00680 ATGAATATACTCTTTTTGTCTAAAAGAGAAGGAGTAGTGTGGCTGCAAGAGGAGGAGGAGAAGAAGAAGAAGACAACCCTGACATCACAAACTCACAGATCTATTGCTTTCTGCTTCTGTCAATTCGTTCATCCAGTTCCGCGGCTCTGTCGTGGTTCACTGTTGGTTCTGTTTCATGAAATTGAAACCCTAATGGCAAGCCATCAAGGGAAAGTTCCTCCTTCGAATGGGTCTGTGTATGTATGCAACTTGCCTTTTGGCACTGACGAAACCATGTTGGCCGAGTATTTTGGCACCATTGGTTTGATCAAGAAAGATAAACGGACCGGGAGGCCTAAAATATGGTTATATCGAGACAAAGAGACTAATGAACCAAAGGGAGATGCGACTGTAACATATGAAGATCCGCATGCCGCTGTAGCTGCTGTTGAATGGTTTAACAACAAGGATTTTCATGGTAGTACAATTGGAGTTTTTATAGCTGAGTCAAAAAACAAAGACGAGCAAGCCTATAATTCAGTGGCAGAACCGGCTGTTGCTGCTCTTTCTTGCTCTTTTAATCGCTGTGGAAGTGCTCGTCCAGTTGGTGCTGCTGGTGTTGCTGGGGGTGGTGGTCGTGGCAAGGGACGTGCCAGTCAAGGTCAAGAGTCAGGGGGTGTTGGCCGTCCAGTTACCGGGGGACTCTTTGGGCCGAATGACTGGCCTTGTCCAATGTGTGGTAACATCAATTGGGCGAAGCGGACTAAATGCAATATTTGCAATACAAATAAGCCTGGCCACAATGAGGGTGGTGTAAGAGGAGGGCGAGGTGGAGGTTACAAAGAGCTGGATGAAGAAGAAATTGAGGAAACTAGACGTCGTAGGCGGGAGGCTGAAGATGATGGGGAGTTGTATGATGAATTTGGAAATCTTAAGAAGAAATTCCGTGCTAAAACACAGCAGGCTGAAGCTGCAAGAGTGCTTCCTGGTTCAGGGCGTGCTGGGTGGGAGGTTGAGGACCTAGGGATTGACAGGGATTCCAGAGAAAGAAGTAGAGACAGGGTGAGAGATCGTAATGATGGGGAGAGCAGGAACAGAGATCGAAATGAAAAAGAGAGGCCAAGCAGTCGGATCAGAGAGAGGGACAGGGGAAGGGATCGTGACTGGGATTACGATGATCGAGATAGAGATTATGGCCGCGATCGAGACCGGGACCGGGGTAGGCATCGTCACTAA 1215 0.4798 MNILFLSKREGVVWLQEEEEKKKKTTLTSQTHRSIAFCFCQFVHPVPRLCRGSLLVLFHEIETLMASHQGKVPPSNGSVYVCNLPFGTDETMLAEYFGTIGLIKKDKRTGRPKIWLYRDKETNEPKGDATVTYEDPHAAVAAVEWFNNKDFHGSTIGVFIAESKNKDEQAYNSVAEPAVAALSCSFNRCGSARPVGAAGVAGGGGRGKGRASQGQESGGVGRPVTGGLFGPNDWPCPMCGNINWAKRTKCNICNTNKPGHNEGGVRGGRGGGYKELDEEEIEETRRRRREAEDDGELYDEFGNLKKKFRAKTQQAEAARVLPGSGRAGWEVEDLGIDRDSRERSRDRVRDRNDGESRNRDRNEKERPSSRIRERDRGRDRDWDYDDRDRDYGRDRDRDRGRHRH 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00680 404 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 15 184 403 - -
Adu03g00680 404 PANTHER ZINC FINGER RAN-BINDING DOMAIN-CONTAINING PROTEIN 2 ZRANB2-RELATED 65 175 - -
Adu03g00680 404 Coils Coil 274 294 - -
Adu03g00680 404 MobiDBLite consensus disorder prediction 335 404 - -
Adu03g00680 404 CDD RRM_SARFH 79 161 - -
Adu03g00680 404 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 79 156 IPR000504 GO:0003723
Adu03g00680 404 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 77 163 IPR000504 GO:0003723
Adu03g00680 404 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 15 65 175 - -
Adu03g00680 404 Gene3D - 229 260 - -
Adu03g00680 404 SMART zf_4 232 256 IPR001876 -
Adu03g00680 404 MobiDBLite consensus disorder prediction 201 226 - -
Adu03g00680 404 SUPERFAMILY RNA-binding domain, RBD 74 166 IPR035979 GO:0003676
Adu03g00680 404 SMART rrm1_1 78 159 IPR000504 GO:0003723
Adu03g00680 404 ProSiteProfiles Zinc finger RanBP2 type profile. 230 259 IPR001876 -
Adu03g00680 404 Gene3D - 76 159 IPR012677 -
Adu03g00680 404 ProSitePatterns Zinc finger RanBP2-type signature. 234 253 IPR001876 -
Adu03g00680 404 SUPERFAMILY Ran binding protein zinc finger-like 226 260 IPR036443 -
Adu03g00680 404 MobiDBLite consensus disorder prediction 335 397 - -
Adu03g00680 404 MobiDBLite consensus disorder prediction 271 294 - -
Adu03g00680 404 MobiDBLite consensus disorder prediction 259 294 - -
Adu03g00680 404 PANTHER ZINC FINGER RAN-BINDING DOMAIN-CONTAINING PROTEIN 2 ZRANB2-RELATED 184 403 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00680 - - aip:107628735 527.324