Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00676 ATGTCAAAATACTGTGGAAAGTTGAAGAGAATCTTGAATCATCAAAAGAGATGTAATGTTACGAAGTTGGGGATTAGAATCAATAACTTCCCTGGAGGCCCAGATGGGTTTGAACTTGTTTCAAGGTTCTGTTACAATAACGGCAACATTCCAATCACTGTGGCTAATGTTCCTCTCCTCTATTGCTGTGCCATTTATCTTGGAATGGCAGAAGGGGTTTTCAGCAACAATCTCTTGCAACAAACAGAAACATTTCTTGATAGAATCTCTCAGTGGAAATGGCATGATATAATTGAAAGTCTCATGAATTGTGAGCATGTGTATGCATATGCAGATTGCTATGGCCTCTTAGAAAGGATCATTGTTGGTGGAGTGTTACCAAAGATTAATCAAACTCCAAATTCTTCAGATGTAAGCTTCATCAATTCATGTTCTTCACCATCCTCATATTCTTCCCCAGAAAGCACTTCGGGTAATAAGAGATTCTCTTCCTCATCAAACAAACTGGCTAATACTCCAGAAAAAATCAGGTCAGCTTTGCCAAGCAAAGCATGGTGGTTTGATGATTTGGCAACTTTACCCCCAAAGATCATTGAGAAACTCTTCCAATTTCTTGGTGCATACAAAACTGACAACAACAATTTAGTCCTCACAAGGTTTTTGTTGCATTATCTGAGAAAAGCAACTCAAAAAACCAGAGTTGTCGATTGCAAAAACAGCAGTGAGAGTGAGTATGCCGCTCTTGCAGAAACAGCAGCTTATGGTGTCATTTTTGTTGGAAAGGAAACATTTTCATGCAGAGGGCTATTTTGGGTAATAAGGATTGTATCCGGTTTTGGTTTGAGTAAAGGTTGCAGGACTGAACTTGAAAGATTAATTGGTGGTGTCCTTGAACAAGCTACTTTGGATGATCTTTTGGTATCTGGCCATGATATGGGAGTTTATTATGATGTTAATTTGGTCATAAGATTGGTTAAACTCTTTGTTGATATCAATGGTTCTGATGAAGGAGTTTCATTACAGAAACTGAAAAGGGTTGGTAGGTTAATTGACAAGTATTTGAGGGAGATATCACCTGATCAGAATCTCAAGATCTGTAAGTTTCTTGGAGTAGCAGAATGCTTGCCAGATATTGCAAGGGATAGCTTTGATGGGGTCTATAGAGCCATTGACATCTATCTTGAGTCTCATCCTATGATCACATTCGAGGAAAGATCAAGATTGTGTAGATGTCTTAATTACATTAAACTCAGCTTTGAAGCTAGTAAGGATCTGGCCAAGAACCCCAGAATACCTCCAAGGATTGCAATGCAGGCTCTTATTTCTCAGCAATCAAAAATTGCAACACTGGACTATGATGAGACCGAGACTCCAAGAAAGAAGAATCCTTATCAATTAGTTTTGTACAAAGAAGGTAAGAGGAACAGCTTCTCCAAGGAGAAAAAAGACATGACACTAAACATGGATAAAATGCAATGGAAGGTAGTAGAATTGGAAGAATTATGCAAGGAAATGAACTCAAAGATGGTTAACCGGAATGCATTGTTTAATCATGCTCGTGCCAGATCCTCACCAAGATTATGCTGA 1587 0.3856 MSKYCGKLKRILNHQKRCNVTKLGIRINNFPGGPDGFELVSRFCYNNGNIPITVANVPLLYCCAIYLGMAEGVFSNNLLQQTETFLDRISQWKWHDIIESLMNCEHVYAYADCYGLLERIIVGGVLPKINQTPNSSDVSFINSCSSPSSYSSPESTSGNKRFSSSSNKLANTPEKIRSALPSKAWWFDDLATLPPKIIEKLFQFLGAYKTDNNNLVLTRFLLHYLRKATQKTRVVDCKNSSESEYAALAETAAYGVIFVGKETFSCRGLFWVIRIVSGFGLSKGCRTELERLIGGVLEQATLDDLLVSGHDMGVYYDVNLVIRLVKLFVDINGSDEGVSLQKLKRVGRLIDKYLREISPDQNLKICKFLGVAECLPDIARDSFDGVYRAIDIYLESHPMITFEERSRLCRCLNYIKLSFEASKDLAKNPRIPPRIAMQALISQQSKIATLDYDETETPRKKNPYQLVLYKEGKRNSFSKEKKDMTLNMDKMQWKVVELEELCKEMNSKMVNRNALFNHARARSSPRLC 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00676 528 MobiDBLite consensus disorder prediction 148 168 - -
Adu03g00676 528 Pfam NPH3 family 185 422 IPR027356 -
Adu03g00676 528 ProSiteProfiles NPH3 domain profile. 184 446 IPR027356 -
Adu03g00676 528 PANTHER OS12G0117600 PROTEIN 19 505 IPR043454 -
Adu03g00676 528 Coils Coil 481 508 - -
Adu03g00676 528 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 19 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00676 Adu-Chr3 6315027 6319022 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00676 5 512 EF-hand Containing Proteins AT3G44820 27.500 4.59e-52 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00676 - - adu:107477162 1046.19