Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00646 ATGGAATGCGTGAGAATCCAGAGCACATTGTCTCACAGGAAGAATtggaaatatgatgtgtttgtgagtttcagaggcgagactcgcttcaacttcaccgatcatctttttgctgctttccacagacacggcgtacttgccttcaaggatgatacaaaaatcgagaaaggaggacctatatctgcagggcttctgcaagcaattgaaggatcacaggttctgattgtggtcttctctatcaactatgcttcctccacatggtgcttgcaagaactcgcaaacatagctgattgcattcaaatcccaggacacactgttctgccagttttctatgatgtgagtccaactgaggtgagaaggcaaagtggaaattttgaaaaagcatttatgaaacacgaagaaagattcaaagatgatgcagagatgatggagcaagtggcaagatggaggggagctctaacacaagtagccaatctctctggctgggatctcaaggataaGTCACAATCTGCTGAGATTGAAAAAATTGTCAAAGCGGTAACAAACATATTGAGTCCCAAACCATCATCAAGTCTATCTAATGATGTAGTTGGGATGTACTCCCATTTAGAAGAACTAGAAAAGCTTCTAGTTTTGGACTCACATGatgatgttcgagttttaggcatttgtggaatgggtggcataggaaagtcaactcttgccaCCATTTTATATGAAAAAATCTCTCATCAATACGACATTTCATGCTTTATGGATGATGTAAGCAAAACTTATGCAGATTGTGGTCCAATTGGTGTGAAAAAGCAACTTCTTTGTCAAGCTTTCGTGGAAGAAGAATTTCTACTATGCAATCTTTCGGCAGCAACTAATTTGAttcaaaagtatttatgccatagaaaggttctcatagttctggataatgttgatcaggggattcagttggagaatttggctttaaaacgggaatggctaagtagagggagcagaataatcatagtttctagagatgaacatatattgagagagcatggagtggatgatgtttacaaagttcaactcttaaatgatgagaatgctctccaattattttgtagaaaagctttcaaatgtaaccatgttatagaaggttatgaaagcctgacaaattctgcattaacatatgctaatggactgccattagcaattaaagtattgggttcttttttgtttggccgaagtatatccgaatggagtagtgctttggttagattgagagaaaacccaacaaaagatattatggatgtgttacgaataagttatgatggacttgaggatatggaaaaggaaatgtttcttgatattgcatgttttttttctaacgagaatgaatattatgtaaagaacattttatgtattcgagggtttcatcctgatattggtataagaattctcattgataaatcacttataacttgtgaccggtcggccatagttatgcatgatctgttgagagagttgggtagaagtattgttcgagaaaaatcacccaaagagccaagaaagtggagcaggttatggaatcaaaaggatCTAAGCAATGTCTTGCGGGAAAACAAGATAGCAGAAAATCTTGAAGCCATAGTTCTACCAAGATTTCTTGAAATTAGGGAAGAGTTATCAGTTGAAGCATTATCACAAATGAGCTGCCTTAAATTACTCATACTCAGAGAAGTGAATTTCTCGGGATGCCTTAATTTTCTTTCTAGAGAGTTGGGATATATTGAATGGAAAGAATATCCTTTTACATGTTTGCCATCAAGCTTTCAGCCAAATAAACTCGTTAAATTAATCCTGCATCACAGCAACATCAAAGAACTCTGGGAGGGAATAAAGGATCTACATAATTTGACACATTTGGAACTATGCTATTCCAAAAGCCTTGTAAACATACCAAATTTATCTCAGGCCCCAAATCTTTTGCGACTAGATCTTAAAGGATGTGTTAAACTTGTTCGCCTTCATCCATCCATTGGCTGTTTAAAAAACCTCGGTTACTTGAATCTGGAAAACTGCAGAAGTCTTGTTAGTATTCCCAACAACATATTTGATCTTAATTCTCTTTATAATTTAAATCTATCTGGCTGTTGGAAATTACTTAAAGATCAGTTGTTAGAGCAACCAAGGCAAAGCAAGCAGTTGAATACAGGTCAAAGTGTACAAAGGCACATGACATCCTCCATATGCAAAACTCTTACAAGGCCTCTCCATTTTTTCTCTTCTAGATGGTGTCCCAATTCAGTTGGTTTATTGGTGCCTTCTTTGTCTCGTTTCCCAGCTTTGGAATCTCTTGACATAAGTTTCTGTAATCTAGTTGAAATTCCTGATGCTATTGGACAGTTATGTTGTTTAGAACGTTTAAACATAGGGGGGAACAATTTTGTTACACTACCTCATTGCATCAAGGAACTTCCCAAGCTAAGGGAGTTGAACTTGCAGTACTGTAAGAAACTAAAGTGGTTTCCAAGTACCCTTTTGCCCATAGGAGGAGGTAGCCATAGAAGATTTTACTATGGAGGATTATATGTTTTCAACTGCCCCAATTTGAGTGACAAGAAAGGTTGTGCTGTCACAGTTATTTCATGGATGATAAAAATGATTCAGGTGAACATGCAATGCTCTTTGCCCAGATGCACCATTAAAGTTATTATTCCGGAAAATAAAATTCCAAGGTGGTTCAACAAACAGAATACAGGTAATTCAATGAAAGTGGATTCATCTCCCATTGTGGATGACAATAATTGGATTGGCATTGCCTGTTGTGTGGCATTTGTTGTACATGATGATGATGCTCCAACTGAATATCCTCCTATTCTATTTGGTTGTGGTTTTCGTCGTAATCCAGATAAGGCCGTTTGTTCCATTGCTCCAATACGTCTTAAGAAAGATTGGATCACAACTGAATTAGATCATATGTTGTTAATGTTTTTATCCAGGGATGTTTTTATTAATAATTTTGTAAGTGCTTTAAAAGAAGGAGTATCTGATCTTGATGGTATTGAATTGGTTGCATTGGCTCGTTATCCAGAAGAAGTAGTAGAAGTGAAGAGTTGTGGGTACCGTTGGGTATCTAAGGAAGATTTGGAACATTTAAACCCAGAGAAGATGTATAGCGCCAACTCTTTAGCTTACAATCAGAAGCACAAGTTTCTGGAAATTCAAGATGACCAATAG 3213 0.2309 MECVRIQSTLSHRKNWKYDVFVSFRGETRFNFTDHLFAAFHRHGVLAFKDDTKIEKGGPISAGLLQAIEGSQVLIVVFSINYASSTWCLQELANIADCIQIPGHTVLPVFYDVSPTEVRRQSGNFEKAFMKHEERFKDDAEMMEQVARWRGALTQVANLSGWDLKDKSQSAEIEKIVKAVTNILSPKPSSSLSNDVVGMYSHLEELEKLLVLDSHDDVRVLGICGMGGIGKSTLATILYEKISHQYDISCFMDDVSKTYADCGPIGVKKQLLCQAFVEEEFLLCNLSAATNLIQKYLCHRKVLIVLDNVDQGIQLENLALKREWLSRGSRIIIVSRDEHILREHGVDDVYKVQLLNDENALQLFCRKAFKCNHVIEGYESLTNSALTYANGLPLAIKVLGSFLFGRSISEWSSALVRLRENPTKDIMDVLRISYDGLEDMEKEMFLDIACFFSNENEYYVKNILCIRGFHPDIGIRILIDKSLITCDRSAIVMHDLLRELGRSIVREKSPKEPRKWSRLWNQKDLSNVLRENKIAENLEAIVLPRFLEIREELSVEALSQMSCLKLLILREVNFSGCLNFLSRELGYIEWKEYPFTCLPSSFQPNKLVKLILHHSNIKELWEGIKDLHNLTHLELCYSKSLVNIPNLSQAPNLLRLDLKGCVKLVRLHPSIGCLKNLGYLNLENCRSLVSIPNNIFDLNSLYNLNLSGCWKLLKDQLLEQPRQSKQLNTGQSVQRHMTSSICKTLTRPLHFFSSRWCPNSVGLLVPSLSRFPALESLDISFCNLVEIPDAIGQLCCLERLNIGGNNFVTLPHCIKELPKLRELNLQYCKKLKWFPSTLLPIGGGSHRRFYYGGLYVFNCPNLSDKKGCAVTVISWMIKMIQVNMQCSLPRCTIKVIIPENKIPRWFNKQNTGNSMKVDSSPIVDDNNWIGIACCVAFVVHDDDAPTEYPPILFGCGFRRNPDKAVCSIAPIRLKKDWITTELDHMLLMFLSRDVFINNFVSALKEGVSDLDGIELVALARYPEEVVEVKSCGYRWVSKEDLEHLNPEKMYSANSLAYNQKHKFLEIQDDQ 1070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00646 1070 SMART till_3 17 159 IPR000157 GO:0007165
Adu03g00646 1070 Pfam C-JID domain 897 1041 IPR045344 -
Adu03g00646 1070 Gene3D Ribonuclease Inhibitor 740 864 IPR032675 -
Adu03g00646 1070 Gene3D Ribonuclease Inhibitor 524 739 IPR032675 -
Adu03g00646 1070 SUPERFAMILY L domain-like 493 836 - -
Adu03g00646 1070 Pfam Leucine rich repeat 772 828 IPR001611 GO:0005515
Adu03g00646 1070 Gene3D - 354 438 IPR042197 -
Adu03g00646 1070 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 12 742 - -
Adu03g00646 1070 PRINTS Disease resistance protein signature 296 310 - -
Adu03g00646 1070 PRINTS Disease resistance protein signature 815 831 - -
Adu03g00646 1070 PRINTS Disease resistance protein signature 220 235 - -
Adu03g00646 1070 PRINTS Disease resistance protein signature 389 403 - -
Adu03g00646 1070 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 742 IPR044974 GO:0006952
Adu03g00646 1070 Pfam NB-ARC domain 203 424 IPR002182 GO:0043531
Adu03g00646 1070 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 448 IPR027417 -
Adu03g00646 1070 Pfam TIR domain 17 194 IPR000157 GO:0007165
Adu03g00646 1070 Pfam Leucine Rich Repeat 606 625 IPR011713 -
Adu03g00646 1070 ProSiteProfiles TIR domain profile. 16 184 IPR000157 GO:0007165
Adu03g00646 1070 Gene3D - 11 184 IPR035897 -
Adu03g00646 1070 Gene3D - 185 349 IPR027417 -
Adu03g00646 1070 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 162 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00646 Adu-Chr3 5964117 5967841 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00646 18 823 WRKY Transcription Factor Family AT4G12020 30.593 3.92e-87 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00646 - - adu:107476580 1266.14