Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00618 ATGGAAACTCGGAGCCGGAAGCGGGCGGAGGCTTCCTCAGCTGCCCCTTCATCTTCCTCCTCTGTTCCCACCACTCGTTCCAGCAAGCGCGCACGCCTCAGCCACAACAACGCAAACAACAGCAACAACAACTCTTCCTCTTCTTCTTCCGTCGCAGCCACCGCACCCGCCGCCACAAAAGCAGTCACCACTCGTTCCCGCGCAGCGTCTCGTTCCACCGCCAAGGATCCCTTACCGCCTAAGAACCCTAATCCTCCTCTCCCTCCTCCGATGGACTCAACCAACGAATCATCAGGCTCGCGCAGAAATCGCGGGAAGAATTCCGCCGATAGAGACAATTCCGACAAGGGGAAAGAGAAGGAGCACGATGTCAGGGTCAGGGAAAGGGATGCCGAAAGAGGATTGGCATTGAACATGGAAACTGGAGGCGTTGGAGACGATGATGATGATAGCGAGGGCGGAGTTGGGATTCTGCATCAGAACTTGACATCAGCCAGCAGTGCCCTTCAGGGCCTTCTTCGGAAACTCGGCGCTGGTTTGGACGATCTGCTTCCATCATCGGCCATGGGTTCGTCTTCGGCCTCTCATCAGAGTGGGAGACTGAAGAAAATCCTTTTTGGGTTGAGGGCAGATGGAGAAGAAGGTAGACAGGTGGAGGCATTGACGCAGCTGTGTGAGATGCTCTCGATTGGGACTGAGGAATCGCTCAGCACTTTCTCTGTTGATTCGTTTGTTCCTGTGCTTGTTGGGTTGCTGAATCATGAGAGTAACCCTGATATCATGCTCCTTGCTGCACGGGCGCTTACACATCTCTGTGATGTGTTGCCTTCATCTTGTGCCGCGGTTGTGCATTATGGTGCTGTGTCAATATTCTGTGCGAGGTTGCTTACCATAGAGTATATGGACTTAGCTGAGCAGTCTCTTCAAGCACTAAAGAAGATATCTCAGGAGCACCCAACTGCATGCCTTCGAGCTGGTGCACTTATGGCTGTGCTTTCTTATTTGGATTTCTTTTCTACAGGAGTTCAGCGGGTGGCATTGTCCACTGCTGCAAATATGTGCAAGAAGCTTCCTTCGGATGCAGCTGACTTTGTGATGGAAGCCGTTCCTCTTCTGACCAATCTCCTTCAGTACCATGATGCGAAGGTCCTGGAGCATGCCTCTGTATGTTTGACTCGAATAGCTGAAGCATTTGCATCATCTCCGGACAAATTAGATGAACTGTGTAATCATGGACTAGTAACACAAGCTGCTTCCCTGATTTCAACCAGCAGTTCTGGAGGTGGACAAGCTTCCCTCAGCACATCAACATATACTGGTTTAATACGACTTCTTTCAACCTGCGCAAGTGGGTCACCTCTTGGGGCTAAAACTTTGCTTCTCCTGGGAATCAGTGGTATTCTTAAAGATATTCTATCTGGGTCTGGAGTTTCTTCAAGTGTTTCCGTGTCTCCTGCATTGAGTAGGCCGCCAGATCAGATATTTGAGATTGTGAACCTTGCAAATGAGCTTCTGCCCCCATTGCCACAAGGAACAATTTCCCTCCCTGTAAGTACCAACATGTTTGTTAAAGGGCCTGTTATAAGAAAGCCTCCTACTGGAAGTTCTGGGAAACAAGAAGACACAAACGGAAATGCTCCTGAGATATCTGCTCGGGAGAAACTACTAAATGATCAGCCCGAGTTACTTCAGCAATTTGCAATGGATCTCCTCCCAGTTTTAGTACAGATTTATGGTTCTAGTGTTAATGGTCCAGTTCGGCATAAATGCCTTTCTGTAATTGGAAAACTGATGTATTTCAGTACAGCTGAGATGATCCAGTCTTTGTTGAGTGTGACAAATATATCAAGTTTCTTAGCCGGTGTCCTAGCCTGGAAAGATCCACATGTTCTAGTTCCTGCCTTGCAAATTGCTGAAATTCTTATGGAAAAGCTTCCTGGGACATTTTCTAAGATGTTTATCAGAGAAGGTGTTGTCCATGCAGTGGACCAACTTATTTTGGCTGGTAATTCAACAAGTGTCCCTGCACAAGCATCTTCTGCCGAGAAGGAGAATGATTCTGTATCTGGAGCATCATCTCGCTCTAGGCGTTATCGTCGCCGTAGTGGTAACAACAATCCTGATGGAAATCCCATGGATGATTCTAAGAGTCCAGTTTCGGGAAATGTTGGTTCACCTCCTGGTTCTGTGGATATTCCAGCAGTAAATTCTAGTATCCGGTCATCTGTCAGCACAGCTGCAAAAGCTTTTAAAGACAAGTACTTTCCTTCAGATCCTGGGGCTGCTGAAGTGGGTGTTACTGATGATCTGTTGTGTCTGAAAAATCTCTGCACAAAATTAAATGCTGGTGTTGATGATCAAAGGTCTACTGGAAAGGGGAAATCAAAAACTACAGGATTTGTTGTGGAAGAGATTTCTGCTAACAAGGAAGATTATTTGATTGGGGTTATCTCTGACATGCTAAAGGAACTTGGCAAAGGGGATGGTGTATCTACTTTTGAATTTATTGGCAGTGGTGTTGTTGCAGCTTTGCTCAATTATTTTTCTTGTGGAAATTTCTCCAAGGACCGAACCTCTGAAACCAACCTTCCCAAGCTTCGCCAGCTAGCACTTACAAGGTTTAAGTTATTTATAGCTGTCGCACTTCCTCCTAGTACTCATGAGGGTTCTGTTGCTCCAATGACTGTCTTGGTCCAGAAGCTTCAAAATGCATTATCTTCCTTAGAGCGTTTCCCTGTGGTTCTTAGCCATTCATCTAGGTCTTCTAGTGGAAGTGCACGCCTCTCTTCTGGACTAAGTGCTTTGTCTCAACCCTTTAAGTTGCGTCTCTGTCGAGCCCAGGGTGAAAAGTCACTCAAGGACTATTCATCGAATGTTGTGCTGATTGATCCATTGGCATGTCTAGCAGCGATTGAGGAATTTCTTTGGCCCCGTATCCAGCGAAGTGAATCTGGTCAGAAGGTGTCCATACCAGCTGGGAACTCTGAATCTGGTACAACTCCTGCACAGGCTGGCGTTCCATCACCTTCTACGTCTACTCCATCCACTACCCGTCGTCATTCTACCAGATCTAGATCATCCGTTAATATAGGTGATACAGCAAAAAAGGAGACAACTCCAGATAAAGGCACAAGCTCGTCTAAGGGCAAGGGAAAAGCTGTTTTAAAGCCAGCACAAGAAGAGGCAAGAGGGCCTCAAACCAGGAATGCAGCACGCAGAAGAGCAGCTCTTGATAAAGAAGAGCAAATGAAGCCGGTAAATGGCGACTCCACTTCCGAGGATGAGGAACTGGATATTTCCCCTGTTGAGATCGATGAGGCATTGGTGATTGAAGATGATGACATCTCTGATGACGAAGATGATGACCATGAAGATGTTTTGAGGGATGATTCTCTTCCTGTTTGCTTGCCTGACAAAGTACATGATGTGAAATTGGGTGACTCGGCTGAAGAGAGTAGTGCTGCTCCCGCTACAGGTGATGGCCAGACTAATGCTGCCTCAGGTTCTAGCAGCAAAGTTGGTACTGCTAGGGGATCGGACTCGGCTGATTTTAGGAGTAGCTATTCATCTGGTTCAAGAGGTGCAATGTCCTTTGCTGCTGCTGCCATGGCAGGACTTGGATCTGCTAATAACAGAGGTATCAGGGGTGGTAGGGATAGGCAAGGACGACCACTGTTCAGTAGTTCTAATGAACCTCCGAAGTTGATCTTTACTGCTGGTGGGAAGCAGCTTAACAGGCATTTGACTATATATCAAGCGATTCAAAGACAACTGGTGCTAGATGAAGATGATGATGAGAGGTTTGGTGGCAGTGACTATGTCTCCAGCGATGGAAACAGGCTATGGGGTGATATTTACACCATAACTTATCAGAGGGCAGATAGCCAAACGGATAGGGCTTCCACTGGTGGTTCAAGTTCTAATGTGTCAAAATCTGCCAAATCTGGTTCTGTGTCGAATTCTAGTACTGAACCAAAGCTTCATCAGGCATCCGTTCTTGATAGCATTTTGCAGGGAGAATTGCCTTGTGAGCTTGAGAAATCTAATCCTACATACAATATATTGGCGCTATTGCGTGTTTTGGAGGGTTTGAACCAGCTTGCACCTCGCTTGAGGGCCCAGGTCATTACTGAGAGTTTTGCTGAGGGGAAGCTTTCAAATTTAGATGAGTTAGGTGTTACCACTGGTGCAAGAGTTACTTCAGAAGAATTCATAAGCAGCAAATTAACTCCAAAATTAGCTAGGCAGATACAAGATGCCCTTGCCCTGTGTAGTGGGAGTCTTCCCTCATGGTGTTACCAGTTAACTAAAGCATGCCCATTTTTGTTTCCTTTTGAGACCAGGCGACAGTACTTTTATTCAACTGCCTTTGGGTTATCCCGTGCCCTGTATCGACTTCAACAGCAGCAGGGTGCTGATGGTCATGGATCAGCAAATGAAAGAGAGGTAAGGGTTGGGAGATTGCAGCGTCAAAAGGTTCGTGTCTCTCGAAACCGCATATTGGATTCTGCTGCTAAAGTGATGGAGATGTATTCTAGCCAAAAGGCTGTACTTGAAGTTGAATATTTTGGTGAAGTTGGTACTGGCCTTGGTCCCACACTTGAGTTTTATACACTTCTAAGTCATGACTTGCAAAAAGTTGGACTACAAATGTGGAGATCAGATTCCTCAGAGAAATATCAAATGGAAATTGATGGAGATGAAAAGAAAATGAAAAGCAGTGAAGGTTCTCTTGCTGGTGATGGAGAACTTGTTCAAGCTCCTCTTGGGTTGTTTCCACAGCCTTGGCCTTCAAATGCCGATGCAACAGAGGGTAGTCAGTTTTCCAAGGCAATCGAGTATTTCCGACTTTTGGGCCGTGTGGTTGCTAAAGCTCTCCAGGATGGACGTCTATTGGATTTGCCCTTGTCAGTGGCATTTTATAAGCTTATTCTTGGTCAAGAGCTTGATTTGCATGACATTCTTTTCATTGATGCTGAGCTTGGAAAAACTTTGCAAGAGTTGAATGCACTTGTCTGCCGGAAATATTATCTAGAATCTACTGGTGGTAGTTACACCGATGTGAATAGTAATTTACATTTTCGTGGGGCTCCGGTTGAAGACCTCTGCTTGGATTTTACTCTTCCTGGCTATCCTGAGTACATCTTGAAATCAGGAGATGAAATTGTTGACATTAATAATTTGGAAGAGTATATATCTTTGGTGGTTGATGCAACTGTCAAGACTGGGATCACACGTCAAATGGAAGCATTTAAAGCAGGATTCAACCAGGTTTTTGACATATCGTCTTTGCAAATTTTTACTCCTCAAGAACTGGACTACCTGCTTTGTGGTCGTAGGGAGATGTGGAAGGCTGATACACTAGTTGACCATATAAAATTTGACCATGGATACACTGCCAAGAGCCCTGCCATAGTCAATTTACTTGAAATTATGGGAGAGTTTACACCAGAACAGCAACGCGCTTTCTGTCAATTTGTTACTGGTGCACCTAGGCTACCCCCTGGTGGACTGGCAGTTCTAAATCCGAAACTAACTATTGTGAGGAAGCTTTCGTCAACTGCAGCCAATGCTTCGTCTAATGGGAATGGGCCTTCGGAATCAGCAGATGATGACTTGCCAAGTGTGATGACATGTGCTAATTACCTGAAGCTTCCTCCTTATTCTACCAAGGAAGTTATTTTGGGCTGGTCATCGAAAGTTGTGGCAAAGTTCAGCTGA 5721 0.4583 METRSRKRAEASSAAPSSSSSVPTTRSSKRARLSHNNANNSNNNSSSSSSVAATAPAATKAVTTRSRAASRSTAKDPLPPKNPNPPLPPPMDSTNESSGSRRNRGKNSADRDNSDKGKEKEHDVRVRERDAERGLALNMETGGVGDDDDDSEGGVGILHQNLTSASSALQGLLRKLGAGLDDLLPSSAMGSSSASHQSGRLKKILFGLRADGEEGRQVEALTQLCEMLSIGTEESLSTFSVDSFVPVLVGLLNHESNPDIMLLAARALTHLCDVLPSSCAAVVHYGAVSIFCARLLTIEYMDLAEQSLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDAKVLEHASVCLTRIAEAFASSPDKLDELCNHGLVTQAASLISTSSSGGGQASLSTSTYTGLIRLLSTCASGSPLGAKTLLLLGISGILKDILSGSGVSSSVSVSPALSRPPDQIFEIVNLANELLPPLPQGTISLPVSTNMFVKGPVIRKPPTGSSGKQEDTNGNAPEISAREKLLNDQPELLQQFAMDLLPVLVQIYGSSVNGPVRHKCLSVIGKLMYFSTAEMIQSLLSVTNISSFLAGVLAWKDPHVLVPALQIAEILMEKLPGTFSKMFIREGVVHAVDQLILAGNSTSVPAQASSAEKENDSVSGASSRSRRYRRRSGNNNPDGNPMDDSKSPVSGNVGSPPGSVDIPAVNSSIRSSVSTAAKAFKDKYFPSDPGAAEVGVTDDLLCLKNLCTKLNAGVDDQRSTGKGKSKTTGFVVEEISANKEDYLIGVISDMLKELGKGDGVSTFEFIGSGVVAALLNYFSCGNFSKDRTSETNLPKLRQLALTRFKLFIAVALPPSTHEGSVAPMTVLVQKLQNALSSLERFPVVLSHSSRSSSGSARLSSGLSALSQPFKLRLCRAQGEKSLKDYSSNVVLIDPLACLAAIEEFLWPRIQRSESGQKVSIPAGNSESGTTPAQAGVPSPSTSTPSTTRRHSTRSRSSVNIGDTAKKETTPDKGTSSSKGKGKAVLKPAQEEARGPQTRNAARRRAALDKEEQMKPVNGDSTSEDEELDISPVEIDEALVIEDDDISDDEDDDHEDVLRDDSLPVCLPDKVHDVKLGDSAEESSAAPATGDGQTNAASGSSSKVGTARGSDSADFRSSYSSGSRGAMSFAAAAMAGLGSANNRGIRGGRDRQGRPLFSSSNEPPKLIFTAGGKQLNRHLTIYQAIQRQLVLDEDDDERFGGSDYVSSDGNRLWGDIYTITYQRADSQTDRASTGGSSSNVSKSAKSGSVSNSSTEPKLHQASVLDSILQGELPCELEKSNPTYNILALLRVLEGLNQLAPRLRAQVITESFAEGKLSNLDELGVTTGARVTSEEFISSKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALYRLQQQQGADGHGSANEREVRVGRLQRQKVRVSRNRILDSAAKVMEMYSSQKAVLEVEYFGEVGTGLGPTLEFYTLLSHDLQKVGLQMWRSDSSEKYQMEIDGDEKKMKSSEGSLAGDGELVQAPLGLFPQPWPSNADATEGSQFSKAIEYFRLLGRVVAKALQDGRLLDLPLSVAFYKLILGQELDLHDILFIDAELGKTLQELNALVCRKYYLESTGGSYTDVNSNLHFRGAPVEDLCLDFTLPGYPEYILKSGDEIVDINNLEEYISLVVDATVKTGITRQMEAFKAGFNQVFDISSLQIFTPQELDYLLCGRREMWKADTLVDHIKFDHGYTAKSPAIVNLLEIMGEFTPEQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKLSSTAANASSNGNGPSESADDDLPSVMTCANYLKLPPYSTKEVILGWSSKVVAKFS 1906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00618 1906 MobiDBLite consensus disorder prediction 103 133 - -
Adu03g00618 1906 MobiDBLite consensus disorder prediction 983 1133 - -
Adu03g00618 1906 ProSiteProfiles HECT domain profile. 1612 1894 IPR000569 GO:0004842
Adu03g00618 1906 MobiDBLite consensus disorder prediction 1294 1326 - -
Adu03g00618 1906 MobiDBLite consensus disorder prediction 983 1034 - -
Adu03g00618 1906 CDD HECTc 1491 1893 IPR000569 GO:0004842
Adu03g00618 1906 MobiDBLite consensus disorder prediction 704 724 - -
Adu03g00618 1906 Gene3D Hect, E3 ligase catalytic domain 1783 1896 - -
Adu03g00618 1906 MobiDBLite consensus disorder prediction 1092 1126 - -
Adu03g00618 1906 MobiDBLite consensus disorder prediction 1209 1233 - -
Adu03g00618 1906 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TRIP12 85 1894 IPR045322 GO:0006511|GO:0061630
Adu03g00618 1906 SUPERFAMILY Hect, E3 ligase catalytic domain 1484 1894 IPR035983 GO:0004842
Adu03g00618 1906 MobiDBLite consensus disorder prediction 1147 1188 - -
Adu03g00618 1906 MobiDBLite consensus disorder prediction 1 133 - -
Adu03g00618 1906 PANTHER HECT E3 UBIQUITIN LIGASE-RELATED 85 1894 - -
Adu03g00618 1906 MobiDBLite consensus disorder prediction 676 736 - -
Adu03g00618 1906 Gene3D Hect, E3 ligase catalytic domains 1431 1674 - -
Adu03g00618 1906 MobiDBLite consensus disorder prediction 676 692 - -
Adu03g00618 1906 MobiDBLite consensus disorder prediction 1066 1091 - -
Adu03g00618 1906 SMART hect_3 1502 1906 IPR000569 GO:0004842
Adu03g00618 1906 Pfam HECT-domain (ubiquitin-transferase) 1539 1893 IPR000569 GO:0004842
Adu03g00618 1906 SUPERFAMILY ARM repeat 201 669 IPR016024 -
Adu03g00618 1906 MobiDBLite consensus disorder prediction 10 71 - -
Adu03g00618 1906 Gene3D - 208 679 IPR011989 -
Adu03g00618 1906 SMART arm_5 232 273 IPR000225 GO:0005515
Adu03g00618 1906 SMART arm_5 358 396 IPR000225 GO:0005515
Adu03g00618 1906 SMART arm_5 315 355 IPR000225 GO:0005515
Adu03g00618 1906 MobiDBLite consensus disorder prediction 1155 1188 - -
Adu03g00618 1906 MobiDBLite consensus disorder prediction 78 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00618 Adu-Chr3 5651395 5660098 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00618 K10590 - gmx:100783336 2957.93