Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00615 ATGGCATCCAAGAGAATCCTGAAGGAGCTCAAGGACTTGCAGAGAGACCCTCCAACTTCATGCAGTGCAGGCCCTGTGGGTGAGGACATGTTCCATTGGCAAGCAACAATCATTGGCCCAAATGACAGTCCCTATGCTGGTGGTGTCTTCCTTGTCACTATCCATTTTCCTCCTGATTATCCCTTCAAACCTCCCAAGGTTGCATTCAGGACCAAGGTATTCCATCCCAACATAAACAGTAATGGCAATATTTGTCTAGATATACTGAAAGAACAATGGAGTCCTGCTCTTACCATATCCAAGGTAATGCATGCATGGATATATTTTTCTTGTTCTGTTTCATGA 345 0.4435 MASKRILKELKDLQRDPPTSCSAGPVGEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVMHAWIYFSCSVS 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00615 114 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 1 114 IPR000608 -
Adu03g00615 114 CDD UBCc 3 105 IPR000608 -
Adu03g00615 114 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 74 89 IPR023313 -
Adu03g00615 114 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 3 103 - -
Adu03g00615 114 SUPERFAMILY UBC-like 2 105 IPR016135 -
Adu03g00615 114 PANTHER BNAA01G32320D PROTEIN 3 103 - -
Adu03g00615 114 SMART ubc_7 4 114 - -
Adu03g00615 114 Pfam Ubiquitin-conjugating enzyme 5 105 IPR000608 -
Adu03g00615 114 Gene3D Ubiquitin Conjugating Enzyme 1 110 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00615 Adu-Chr3 5633730 5635478 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00615 2 109 Miscellaneous Gene Families AT3G17000 38.053 8.35e-20 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00615 - K06689 gmx:100805577 219.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00615 03 5633730 5635478 Adu03g00615 03 5633730 5635478 ECH